RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 FAM90A1Q86YD7 464 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 CALHM1Q8IU99 346 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 CCDC28AQ8IWP9 274 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 Q8IYB0 196 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 SAXO1Q8IYX7 474 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 POC1AQ8NBT0 407 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 TSPAN14Q8NG11 270 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 OR13C9Q8NGT0 318 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 LRRC29Q8WV35 223 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 TMEM158Q8WZ71 300 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 RPL3LQ92901 407 aaKnown RBP8.27□□□□□ -1.09
GGA3-209ENST00000580646 TMEM186Q96B77 213 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 RAB39BQ96DA2 213 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 OR14A2Q96R54 314 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 DNTTIP1Q9H147 329 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 LPAR2Q9HBW0 351 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 TMEM138Q9NPI0 162 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 HIF1ANQ9NWT6 349 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 NDUFB11Q9NX14 153 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 DCAF16Q9NXF7 216 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 CKLFQ9UBR5 152 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 CUBNO60494 3623 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 IGHV3-64DA0A0J9YX35 117 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 FAM230AA0A1W2PPH8 454 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 FAM25AB3EWG3 89 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 FAM25CB3EWG5 89 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 FAM25GB3EWG6 89 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 F5H0A9 414 aaPredicted RBP8.26□□□□□ -1.09
GGA3-209ENST00000580646 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.26□□□□□ -1.09
GGA3-209ENST00000580646 TNFRSF13BO14836 293 aaPredicted RBP8.26□□□□□ -1.09
GGA3-209ENST00000580646 IGHV2-5P01817 119 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 MSMBP08118 114 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 UCHL1P09936 223 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 SRP14P37108 136 aaKnown RBP8.26□□□□□ -1.09
GGA3-209ENST00000580646 ERVK11-1P61568 191 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 PPP3R1P63098 170 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 OXA1LQ15070 435 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 KISS1Q15726 138 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 MICBQ29980 383 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 ACSM3Q53FZ2 586 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 CRIP3Q6Q6R5 217 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 CD200R1LQ6Q8B3 271 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 CLVS1Q8IUQ0 354 aaPredicted RBP8.26□□□□□ -1.09
GGA3-209ENST00000580646 MKXQ8IYA7 352 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 LINC00469Q8N7U9 141 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 NKAIN3Q8N8D7 197 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 ZSCAN4Q8NAM6 433 aaPredicted RBP8.26□□□□□ -1.09
GGA3-209ENST00000580646 OR13C5Q8NGS8 318 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 OR51F2Q8NH61 342 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 TRMT10AQ8TBZ6 339 aaKnown RBP8.26□□□□□ -1.09
GGA3-209ENST00000580646 S100ZQ8WXG8 99 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 GAL3ST1Q99999 423 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 NRIP2Q9BQI9 281 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 TMED9Q9BVK6 235 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 ZNF665Q9H7R5 613 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 SEBOXQ9HB31 216 aaPredicted RBP8.26□□□□□ -1.09
GGA3-209ENST00000580646 PATZ1Q9HBE1 687 aaKnown RBP8.26□□□□□ -1.09
GGA3-209ENST00000580646 HES4Q9HCC6 221 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 C12orf4Q9NQ89 552 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 TAS2R4Q9NYW5 299 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 KAAG1Q9UBP8 84 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 MIOXQ9UGB7 285 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 DAPK2Q9UIK4 370 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 DSCAML1Q8TD84 2053 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 WNK2Q9Y3S1 2297 aa8.26□□□□□ -1.09
GGA3-209ENST00000580646 MXRA5Q9NR99 2828 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 TRAV20A0A0B4J274 112 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 ISPDA4D126 451 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 MEGF11A6BM72 1044 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 CEACAM18A8MTB9 384 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 A8MXK9 166 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 PIN1P1O15428 100 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 RHBDL1O75783 438 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 ARL6IP5O75915 188 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 RGS9O75916 674 aaPredicted RBP8.25□□□□□ -1.09
GGA3-209ENST00000580646 CYB5AP00167 134 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 HCKP08631 526 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 EGR1P18146 543 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 GLRA1P23415 457 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 BDKRB2P30411 391 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 TGFBR2P37173 567 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 NPY4RP50391 375 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 ZP1P60852 638 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 PDZK1IP1Q13113 114 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 SSX1Q16384 188 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 SMIM21Q3B7S5 101 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 DMRTC1Q5HYR2 192 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 ATPAF1Q5TC12 328 aaPredicted RBP8.25□□□□□ -1.09
GGA3-209ENST00000580646 TMEM91Q6ZNR0 172 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 AKAP14Q86UN6 197 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 PXT1Q8NFP0 134 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 NPRL2Q8WTW4 380 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 CHAC2Q8WUX2 184 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 MUL1Q969V5 352 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 ZNF486Q96H40 463 aaPredicted RBP8.25□□□□□ -1.09
GGA3-209ENST00000580646 TMEM246Q9BRR3 403 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 CENPOQ9BU64 300 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 HMG20AQ9NP66 347 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 NOX4Q9NPH5 578 aa8.25□□□□□ -1.09
GGA3-209ENST00000580646 POLR3KQ9Y2Y1 108 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms