RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 CLN8Q9UBY8 286 aa4.03□□□□□ -1.76
GAPLINC-202ENST00000579007 STUB1Q9UNE7 303 aa4.03□□□□□ -1.76
GAPLINC-202ENST00000579007 PEX16Q9Y5Y5 336 aa4.03□□□□□ -1.76
GAPLINC-202ENST00000579007 NOTCH1P46531 2555 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 LOC102725191A0A1B0GVB3 256 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 MEX3AA1L020 520 aaKnown RBP4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 M0R233 179 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 ITGB1BP1O14713 200 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 IMPA2O14732 288 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 TIMM23O14925 209 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 SYNGR3O43761 229 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 FAM20BO75063 409 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 OR2J3O76001 311 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 FSHBP01225 129 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 OPN1SWP03999 348 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 FCER2P06734 321 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 FGF2P09038 288 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 CD79AP11912 226 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 NR4A1P22736 598 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 AADACP22760 399 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 COL8A2P25067 703 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 CFPP27918 469 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 AQP1P29972 269 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 ARR3P36575 388 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 RPL13AP40429 203 aaKnown RBP4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 NPBWR2P48146 333 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 SLURP1P55000 103 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 B2MP61769 119 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 LMO4P61968 165 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 PUDPQ08623 228 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 KLF5Q13887 457 aaPredicted RBP4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 HNF4GQ14541 408 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 ATXN7L3Q14CW9 347 aaPredicted RBP4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 C6orf183Q5T699 404 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 RFPL4BQ6ZWI9 263 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 CYP4Z1Q86W10 505 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 SELENOHQ8IZQ5 122 aaKnown RBP4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 KIRREL3Q8IZU9 778 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 OR10A7Q8NGE5 316 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 OR1L6Q8NGR2 347 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 OSR1Q8TAX0 266 aaPredicted RBP4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 TMEM255BQ8WV15 326 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 PHLDA1Q8WV24 401 aaPredicted RBP4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 FCAMRQ8WWV6 532 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 TMEM54Q969K7 222 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 DACT3Q96B18 629 aaPredicted RBP4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 TLCD1Q96CP7 247 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 ARHGDIGQ99819 225 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 TMEM246Q9BRR3 403 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 ZNF426Q9BUY5 554 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 HINT2Q9BX68 163 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 PLA2G12AQ9BZM1 189 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 ULBP2Q9BZM5 246 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 CENPHQ9H3R5 247 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 METTL17Q9H7H0 456 aaPredicted RBP4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 MAP6D1Q9H9H5 199 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 S100A14Q9HCY8 104 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 SLCO1B3Q9NPD5 702 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 ESM1Q9NQ30 184 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 MRPL39Q9NYK5 338 aaKnown RBP4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 ATPIF1Q9UII2 106 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 PRPF19Q9UMS4 504 aaKnown RBP4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 PRELID1Q9Y255 219 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 WIPI2Q9Y4P8 454 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 PUS1Q9Y606 427 aaKnown RBP eCLIP4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 CACNG2Q9Y698 323 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 USH1CQ9Y6N9 552 aa4.02□□□□□ -1.77
GAPLINC-202ENST00000579007 IGLV3-9A0A075B6K5 115 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 IGKV1D-43A0A0B4J1Z2 117 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 TMEM210A6NLX4 147 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 C11orf98E9PRG8 122 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 KPNA4O00629 521 aaPredicted RBP4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 PLPP3O14495 311 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 RAB29O14966 203 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 UBDO15205 165 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 MLNRO43193 412 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 CHP2O43745 196 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 UBL3O95164 117 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 MSMBP08118 114 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 MMP7P09237 267 aaPredicted RBP4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 UBCP0CG48 685 aaKnown RBP4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 PGA4P0DJD7 388 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 PGA3P0DJD8 388 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 ANXA3P12429 323 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 NQO1P15559 274 aaKnown RBP4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 H2AFXP16104 143 aaPredicted RBP4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 CD40LGP29965 261 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 GLRXP35754 106 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 SRP14P37108 136 aaKnown RBP4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 GPR6P46095 362 aaPredicted RBP4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 CSNK1A1P48729 337 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 EVX1P49640 407 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 RASSF2P50749 326 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 BIDP55957 195 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 MTPNP58546 118 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 MAGOHP61326 146 aaKnown RBP4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 NCALDP61601 193 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 CDK6Q00534 326 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 GLO1Q04760 184 aa4.01□□□□□ -1.77
GAPLINC-202ENST00000579007 C1DQ13901 141 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms