RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SLC25A26Q70HW3 274 aa10.39□□□□□ -0.75
NPLOC4-213ENST00000573519 KCTD20Q7Z5Y7 419 aa10.39□□□□□ -0.75
NPLOC4-213ENST00000573519 MKXQ8IYA7 352 aa10.39□□□□□ -0.75
NPLOC4-213ENST00000573519 OR10AC1Q8NH08 325 aa10.39□□□□□ -0.75
NPLOC4-213ENST00000573519 CEP19Q96LK0 163 aa10.39□□□□□ -0.75
NPLOC4-213ENST00000573519 RDH12Q96NR8 316 aa10.39□□□□□ -0.75
NPLOC4-213ENST00000573519 HES4Q9HCC6 221 aa10.39□□□□□ -0.75
NPLOC4-213ENST00000573519 MTCH1Q9NZJ7 389 aa10.39□□□□□ -0.75
NPLOC4-213ENST00000573519 SF3B6Q9Y3B4 125 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-213ENST00000573519 RPL36Q9Y3U8 105 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-213ENST00000573519 IGKV1-27A0A075B6S5 117 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 hCG_1809904A0A1W2PP81 198 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 A0A1W2PPE2 198 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 A0A1W2PR64 198 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 A0A1W2PRV1 198 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 CLPSL1A2RUU4 121 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 E9PI62 339 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 F8VVB4 439 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 F8VWA3 439 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 NDUFA7O95182 113 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 IGHA1P01876 353 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 TK1P04183 234 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 CCL3L1P16619 93 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 POU3F4P49335 361 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 RBP2P50120 134 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 ATP1B3P54709 279 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 EDDM3BP56851 147 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 RPL15P61313 204 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 ERVK11-1P61568 191 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 ACTA2P62736 377 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 ACTG2P63267 376 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 SRSF4Q08170 494 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 ACSM1Q08AH1 577 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 RAB40BQ12829 278 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 TAF9Q16594 264 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 ZNF691Q5VV52 312 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 DHRS7BQ6IAN0 325 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 FDX2Q6P4F2 183 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 GDPGP1Q6ZNW5 385 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 EGFL6Q8IUX8 553 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 DHRSXQ8N5I4 330 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 PACRGLQ8N7B6 248 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 OR51A4Q8NGJ6 313 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 PP6455Q8WZ26 134 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 EMG1Q92979 244 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 FGGYQ96C11 551 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 C10orf35Q96D05 121 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 ADAT3Q96EY9 351 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 ZNF649Q9BS31 505 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 SLITRK2Q9H156 845 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 ERVK13-1Q9NX77 482 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 NKX1-2Q9UD57 310 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 VPREB3Q9UKI3 123 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 MMP24Q9Y5R2 645 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 NBEAL1Q6ZS30 2694 aa10.38□□□□□ -0.75
NPLOC4-213ENST00000573519 MEX3AA1L020 520 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 ERICH4A6NGS2 130 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 OR4C45A6NMZ5 311 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 CYB5AP00167 134 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 CHRM2P08172 466 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 COX7A1P24310 79 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 AZGP1P25311 298 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 SNU13P55769 128 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 MTCP1P56278 107 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 ERVFRD-1P60508 538 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 ADARB1P78563 741 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 ALKBH1Q13686 389 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 ZNF273Q14593 569 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 KLHL22Q53GT1 634 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 PRR31Q5SQ13 230 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 OGFRL1Q5TC84 451 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 TTC23Q5W5X9 447 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 HCP5Q6MZN7 132 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 BRICD5Q6PL45 260 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 ZNF782Q6ZMW2 699 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 GDPD3Q7L5L3 318 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 ZNF676Q8N7Q3 588 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 OR13C3Q8NGS6 347 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 C17orf50Q8WW18 174 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 WFDC12Q8WWY7 111 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 MRPL48Q96GC5 212 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 FAM234AQ9H0X4 552 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 ZNF696Q9H7X3 374 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 HEXA-AS1Q9H8Q6 139 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 MRPS18AQ9NVS2 196 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 RNF114Q9Y508 228 aa10.37□□□□□ -0.75
NPLOC4-213ENST00000573519 IGKV1-9A0A0C4DH69 117 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 H3BUX3 64 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 K7N7A8 449 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 ISG15P05161 165 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 GNAO1P09471 354 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 LIMS3P0CW19 117 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 LIMS4P0CW20 117 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 CALCBP10092 127 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 ATF1P18846 271 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 BCL3P20749 454 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 ETV1P50549 477 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 CCR9P51686 369 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 LGALS4P56470 323 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 GABPB1Q06547 395 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms