RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 SELLP14151 372 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 SAA4P35542 130 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 TGFBR2P37173 567 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 ALKBH1Q13686 389 aaKnown RBP13.72□□□□□ -0.21
USB1-211ENST00000565662 UBE2V2Q15819 145 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 ODF4Q2M2E3 257 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 ZIK1Q3SY52 487 aaPredicted RBP13.72□□□□□ -0.21
USB1-211ENST00000565662 PRR31Q5SQ13 230 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 C11orf88Q6PI97 169 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 OR8H2Q8N162 312 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 PACRGLQ8N7B6 248 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 ASCC1Q8N9N2 400 aaKnown RBP13.72□□□□□ -0.21
USB1-211ENST00000565662 BEND2Q8NDZ0 799 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 TNFRSF14Q92956 283 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 EMG1Q92979 244 aaKnown RBP13.72□□□□□ -0.21
USB1-211ENST00000565662 FOXRED1Q96CU9 486 aaPredicted RBP13.72□□□□□ -0.21
USB1-211ENST00000565662 SNX22Q96L94 193 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 OPALINQ96PE5 141 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 ALG8Q9BVK2 526 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 JAM3Q9BX67 310 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 MRPS18AQ9NVS2 196 aaKnown RBP13.72□□□□□ -0.21
USB1-211ENST00000565662 SMPD3Q9NY59 655 aaPredicted RBP13.72□□□□□ -0.21
USB1-211ENST00000565662 OR14J1Q9UGF5 321 aa13.72□□□□□ -0.21
USB1-211ENST00000565662 CLPSL1A2RUU4 121 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 SPRY1O43609 319 aaPredicted RBP13.71□□□□□ -0.21
USB1-211ENST00000565662 AZGP1P25311 298 aaKnown RBP13.71□□□□□ -0.21
USB1-211ENST00000565662 PEX2P28328 305 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 KIR3DL2P43630 455 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 GBX2P52951 348 aaPredicted RBP13.71□□□□□ -0.21
USB1-211ENST00000565662 LGALS4P56470 323 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 OLFML2AQ68BL7 652 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 DHRS7BQ6IAN0 325 aaPredicted RBP13.71□□□□□ -0.21
USB1-211ENST00000565662 SAXO1Q8IYX7 474 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 PIP4P2Q8N4L2 257 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 SETD9Q8NE22 299 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 OR5D14Q8NGL3 314 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 OR13C3Q8NGS6 347 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 OR13D1Q8NGV5 346 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 LGALS12Q96DT0 336 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 C4orf36Q96KX1 117 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 FRRS1LQ9P0K9 344 aa13.71□□□□□ -0.21
USB1-211ENST00000565662 hADV38S2A0JD32 116 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 H3BUI4 141 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 J3QLW9 94 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 ANGPTL7O43827 346 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 GPR137BO60478 399 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 ZNF19P17023 458 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 GABRB1P18505 474 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 ATF1P18846 271 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 MTCP1P56278 107 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 OR12D2P58182 307 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 ZNF146Q15072 292 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 CCDC58Q4VC31 144 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 TTC23Q5W5X9 447 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 SLC25A26Q70HW3 274 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 SERPINA12Q8IW75 414 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 CD177Q8N6Q3 437 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 PELI1Q96FA3 418 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 FAM118AQ9NWS6 357 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 C1RLQ9NZP8 487 aa13.7□□□□□ -0.22
USB1-211ENST00000565662 TBL2Q9Y4P3 447 aaKnown RBP13.7□□□□□ -0.22
USB1-211ENST00000565662 TIMM23O14925 209 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 MAGEB3O15480 346 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 CD2P06729 351 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 DCKP27707 260 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 ELF3P78545 371 aaPredicted RBP13.69□□□□□ -0.22
USB1-211ENST00000565662 IL18R1Q13478 541 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 TMPRSS11AQ6ZMR5 421 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 ANGPTL5Q86XS5 388 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 FAM58AQ8N1B3 248 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 FGFRL1Q8N441 504 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 CHST4Q8NCG5 386 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 ZNF488Q96MN9 340 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 CDCA4Q9BXL8 241 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 VCXQ9H320 206 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 C19orf12Q9NSK7 152 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 ERVK13-1Q9NX77 482 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 MTCH1Q9NZJ7 389 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 LINC00312Q9Y6C7 94 aa13.69□□□□□ -0.22
USB1-211ENST00000565662 A6NIN4 97 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 OR4C45A6NMZ5 311 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 IGHV4-59P01825 116 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 MDKP21741 143 aaPredicted RBP13.68□□□□□ -0.22
USB1-211ENST00000565662 ERP29P30040 261 aaKnown RBP13.68□□□□□ -0.22
USB1-211ENST00000565662 POU3F4P49335 361 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 COL10A1Q03692 680 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 LRRC75BQ2VPJ9 315 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 DMRTC1Q5HYR2 192 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 TMEM200BQ69YZ2 307 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 PDZD9Q8IXQ8 264 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 OR5AK2Q8NH90 309 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 WFDC12Q8WWY7 111 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 SLAMF9Q96A28 289 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 FGGYQ96C11 551 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 ADAT3Q96EY9 351 aaPredicted RBP13.68□□□□□ -0.22
USB1-211ENST00000565662 ZNF714Q96N38 554 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 MEGF9Q9H1U4 602 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 ZCCHC4Q9H5U6 513 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 RANBP3Q9H6Z4 567 aaPredicted RBP13.68□□□□□ -0.22
USB1-211ENST00000565662 DHDHQ9UQ10 334 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms