RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 TLE1Q04724 770 aa14.26□□□□□ -0.13
LINC00554-201ENST00000564841 SGPP2Q8IWX5 399 aa14.26□□□□□ -0.13
LINC00554-201ENST00000564841 THAP3Q8WTV1 239 aaPredicted RBP14.26□□□□□ -0.13
LINC00554-201ENST00000564841 TOMM40LQ969M1 308 aa14.26□□□□□ -0.13
LINC00554-201ENST00000564841 VN1R1Q9GZP7 353 aa14.26□□□□□ -0.13
LINC00554-201ENST00000564841 IL17BQ9UHF5 180 aa14.26□□□□□ -0.13
LINC00554-201ENST00000564841 LRP4O75096 1905 aa14.26□□□□□ -0.13
LINC00554-201ENST00000564841 ELOA3CA0A087WX78 387 aaPredicted RBP14.26□□□□□ -0.13
LINC00554-201ENST00000564841 CEACAM18A8MTB9 384 aa14.26□□□□□ -0.13
LINC00554-201ENST00000564841 ZNF878C9JN71 531 aa14.26□□□□□ -0.13
LINC00554-201ENST00000564841 CDC14BO60729 498 aa14.26□□□□□ -0.13
LINC00554-201ENST00000564841 RPL27P61353 136 aaKnown RBP14.26□□□□□ -0.13
LINC00554-201ENST00000564841 HNRNPKP61978 463 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC00554-201ENST00000564841 C1orf147Q96MC9 270 aaPredicted RBP14.26□□□□□ -0.13
LINC00554-201ENST00000564841 ZNF2Q9BSG1 426 aaPredicted RBP14.26□□□□□ -0.13
LINC00554-201ENST00000564841 HSD11B1P28845 292 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 JOSD1Q15040 202 aaPredicted RBP14.25□□□□□ -0.13
LINC00554-201ENST00000564841 WDR25Q64LD2 544 aaPredicted RBP14.25□□□□□ -0.13
LINC00554-201ENST00000564841 OR2G3Q8NGZ4 309 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 HOXB13Q92826 284 aaPredicted RBP14.25□□□□□ -0.13
LINC00554-201ENST00000564841 DAZLQ92904 295 aaKnown RBP14.25□□□□□ -0.13
LINC00554-201ENST00000564841 LIME1Q9H400 295 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 PADI1Q9ULC6 663 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 C14orf166Q9Y224 244 aaKnown RBP14.25□□□□□ -0.13
LINC00554-201ENST00000564841 CD55P08174 381 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 H2BFMP0C1H6 154 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 GLIPR1P48060 266 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 CXCL12P48061 93 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 FOXK1P85037 733 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 TMEM123Q8N131 208 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 LIPHQ8WWY8 451 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 TMEM59Q9BXS4 323 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 DHRS7CA6NNS2 312 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 HSPB2A8KAH6 182 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 TMEM150CB9EJG8 249 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 FGF7P21781 194 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 HOXA6P31267 233 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 RUNX1Q01196 453 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 HSPB2Q16082 182 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 RSPO4Q2I0M5 234 aaPredicted RBP14.25□□□□□ -0.13
LINC00554-201ENST00000564841 SUMF1Q8NBK3 374 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 OR6X1Q8NH79 312 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 B3GALT1Q9Y5Z6 326 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 WSB1Q9Y6I7 421 aa14.25□□□□□ -0.13
LINC00554-201ENST00000564841 FAM24AA6NFZ4 105 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 FIGNL2A6NMB9 653 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 ADAM10O14672 748 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 DBHP09172 617 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 EDN3P14138 238 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 ZNF823P16415 610 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 GPR3P46089 330 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 SLC37A1P57057 533 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 ICAM4Q14773 271 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 PRSS8Q16651 343 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 GPR87Q9BY21 358 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 TUBD1Q9UJT1 453 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 SIT1Q9Y3P8 196 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 CLDN16Q9Y5I7 305 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 PHF3Q92576 2039 aaKnown RBP14.24□□□□□ -0.13
LINC00554-201ENST00000564841 IFNA21P01568 189 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 SLC10A1Q14973 349 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 CHRFAM7AQ494W8 412 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 SULF2Q8IWU5 870 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 LRRC18Q8N456 261 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 OR5R1Q8NH85 324 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 ZNF519Q8TB69 540 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 TVP23CQ96ET8 276 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 FAM71F1Q96KD3 344 aaPredicted RBP14.24□□□□□ -0.13
LINC00554-201ENST00000564841 GPER1Q99527 375 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 PRO3102Q9H379 93 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 SRPK3Q9UPE1 567 aa14.24□□□□□ -0.13
LINC00554-201ENST00000564841 CCDC187A0A096LP49 1063 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 FAM221BA6H8Z2 402 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 FTCDNL1E5RQL4 147 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 NXPH3O95157 252 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 PNLIPP16233 465 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 ATP6V0CP27449 155 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 PLA2G5P39877 138 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 GLO1Q04760 184 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 PHLDA2Q53GA4 152 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 LBHQ53QV2 105 aaPredicted RBP14.23□□□□□ -0.13
LINC00554-201ENST00000564841 OR51T1Q8NGJ9 327 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 EMG1Q92979 244 aaKnown RBP14.23□□□□□ -0.13
LINC00554-201ENST00000564841 SHDQ96IW2 340 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 NIPSNAP3BQ9BS92 247 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 ZNF581Q9P0T4 197 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 AK3Q9UIJ7 227 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 MARCH11A6NNE9 402 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 UTS2O95399 124 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 ONECUT2O95948 504 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 ISG15P05161 165 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 OR5AC1P0C628 307 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 RRADP55042 308 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 NECAP1Q8NC96 275 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 METTL9Q9H1A3 318 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 GPR27Q9NS67 375 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 KNTC1P50748 2209 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 IGHV3-20A0A0C4DH32 117 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 E5RGE8 158 aa14.23□□□□□ -0.13
LINC00554-201ENST00000564841 LMO7DNF2Z398 122 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms