RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 ZNF728P0DKX0 622 aa13.53□□□□□ -0.24
CCNF-203ENST00000564236 RASSF2P50749 326 aa13.53□□□□□ -0.24
CCNF-203ENST00000564236 LGALS4P56470 323 aa13.53□□□□□ -0.24
CCNF-203ENST00000564236 LY6EQ16553 131 aa13.53□□□□□ -0.24
CCNF-203ENST00000564236 TCF23Q7RTU1 214 aa13.53□□□□□ -0.24
CCNF-203ENST00000564236 Q8IYB0 196 aa13.53□□□□□ -0.24
CCNF-203ENST00000564236 OR13D1Q8NGV5 346 aa13.53□□□□□ -0.24
CCNF-203ENST00000564236 WIPF2Q8TF74 440 aaPredicted RBP13.53□□□□□ -0.24
CCNF-203ENST00000564236 PP6455Q8WZ26 134 aa13.53□□□□□ -0.24
CCNF-203ENST00000564236 SNX22Q96L94 193 aa13.53□□□□□ -0.24
CCNF-203ENST00000564236 OR14J1Q9UGF5 321 aa13.53□□□□□ -0.24
CCNF-203ENST00000564236 TCF19Q9Y242 345 aa13.53□□□□□ -0.24
CCNF-203ENST00000564236 SIGLEC9Q9Y336 463 aa13.53□□□□□ -0.24
CCNF-203ENST00000564236 RPP14O95059 124 aaKnown RBP13.52□□□□□ -0.25
CCNF-203ENST00000564236 OPN1MWP04001 364 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 UBCP0CG48 685 aaKnown RBP13.52□□□□□ -0.25
CCNF-203ENST00000564236 OPN1MW2P0DN77 364 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 OPN1MW3P0DN78 364 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 IGHV1-8P0DP01 117 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 COX7A1P24310 79 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 POLR2IP36954 125 aaKnown RBP13.52□□□□□ -0.25
CCNF-203ENST00000564236 LDLRAD2Q5SZI1 272 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 KPRPQ5T749 579 aaPredicted RBP13.52□□□□□ -0.25
CCNF-203ENST00000564236 LHFPL4Q7Z7J7 247 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 AMIGO2Q86SJ2 522 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 DYNAPQ8N1N2 210 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 PRSS35Q8N3Z0 413 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 TRMT10AQ8TBZ6 339 aaKnown RBP13.52□□□□□ -0.25
CCNF-203ENST00000564236 RFKQ969G6 155 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 EME1Q96AY2 570 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 CENPNQ96H22 339 aaPredicted RBP13.52□□□□□ -0.25
CCNF-203ENST00000564236 ZNF702PQ9H963 129 aa13.52□□□□□ -0.25
CCNF-203ENST00000564236 FAM230AA0A1W2PPH8 454 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 TMEM82A0PJX8 343 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 A6NDX4 124 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 E9PQ18 207 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 J3QRE1 110 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 ATP5HO75947 161 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 SERPINA3P01011 423 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 ISG15P05161 165 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 PAX6P26367 422 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 ZNF85Q03923 595 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 ZNF146Q15072 292 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 CNN3Q15417 329 aaKnown RBP13.51□□□□□ -0.25
CCNF-203ENST00000564236 SLC25A30Q5SVS4 291 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 FDX2Q6P4F2 183 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 CCBE1Q6UXH8 406 aaPredicted RBP13.51□□□□□ -0.25
CCNF-203ENST00000564236 ZNF782Q6ZMW2 699 aaPredicted RBP13.51□□□□□ -0.25
CCNF-203ENST00000564236 UTS2BQ765I0 119 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 ENTHD1Q8IYW4 607 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 KLHDC1Q8N7A1 406 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 ASCC1Q8N9N2 400 aaKnown RBP13.51□□□□□ -0.25
CCNF-203ENST00000564236 FAM110DQ8TAY7 271 aaPredicted RBP13.51□□□□□ -0.25
CCNF-203ENST00000564236 TRUB1Q8WWH5 349 aaKnown RBP13.51□□□□□ -0.25
CCNF-203ENST00000564236 TBX5Q99593 518 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 SERTAD4Q9NUC0 356 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 OAZ3Q9UMX2 235 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 FOXJ3Q9UPW0 622 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 LINC00312Q9Y6C7 94 aa13.51□□□□□ -0.25
CCNF-203ENST00000564236 TRBV2A0A0J9YWF9 115 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 LOC107986453A0A1B0GWG9 222 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 PIPP12273 146 aaPredicted RBP13.5□□□□□ -0.25
CCNF-203ENST00000564236 KIR3DL2P43630 455 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 RBP2P50120 134 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 ZNF91Q05481 1191 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 MINOS1Q5TGZ0 78 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 C1orf146Q5VVC0 180 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 SLC25A26Q70HW3 274 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 GDPD3Q7L5L3 318 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 KCTD20Q7Z5Y7 419 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 BATF2Q8N1L9 274 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 OR10H4Q8NGA5 316 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 RPS4Y2Q8TD47 263 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 SLAMF9Q96A28 289 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 BORCS8Q96FH0 119 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 ZNF714Q96N38 554 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 MBOAT4Q96T53 435 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 PITPNC1Q9UKF7 332 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 MINOS1-NBL1R4GNA1 71 aa13.5□□□□□ -0.25
CCNF-203ENST00000564236 IGKV1-9A0A0C4DH69 117 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 hADV38S2A0JD32 116 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 ARG1P05089 322 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 ERP29P30040 261 aaKnown RBP13.49□□□□□ -0.25
CCNF-203ENST00000564236 EDDM3BP56851 147 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 ODF4Q2M2E3 257 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 BEAN1Q3B7T3 259 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 SPIN3Q5JUX0 258 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 SAMD5Q5TGI4 173 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 TMEM244Q5VVB8 128 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 EGFL6Q8IUX8 553 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 OR2G2Q8NGZ5 317 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 SPSB1Q96BD6 273 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 ADI1Q9BV57 179 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 WNT10AQ9GZT5 417 aa13.49□□□□□ -0.25
CCNF-203ENST00000564236 FAM90A22PA8MWA6 464 aa13.48□□□□□ -0.25
CCNF-203ENST00000564236 PSPNO60542 156 aa13.48□□□□□ -0.25
CCNF-203ENST00000564236 APOL3O95236 402 aa13.48□□□□□ -0.25
CCNF-203ENST00000564236 HAND1O96004 215 aa13.48□□□□□ -0.25
CCNF-203ENST00000564236 PEX2P28328 305 aa13.48□□□□□ -0.25
CCNF-203ENST00000564236 CCR9P51686 369 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms