RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 LHFPL1Q86WI0 220 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 WDFY1Q8IWB7 410 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 OR10G3Q8NGC4 313 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 OR4D6Q8NGJ1 314 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 OR51A2Q8NGJ7 313 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 OR2I1PQ8NGU4 316 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 HIST1H2BLQ99880 126 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 RTBDNQ9BSG5 229 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 ABHD6Q9BV23 337 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 SMOC1Q9H4F8 434 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 AKIRIN1Q9H9L7 192 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 NPIPA1Q9UND3 350 aa12.24□□□□□ -0.45
RABGGTA-220ENST00000560998 LIPT2A6NK58 231 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 EFNA2O43921 213 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 OR2J2O76002 312 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 MPZL1O95297 269 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 PRH1P02810 166 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 CYC1P08574 325 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 GABRR1P24046 479 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 ECI1P42126 302 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 NPY4RP50391 375 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 ZNF41P51814 821 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 QRFPP83859 136 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 MFGE8Q08431 387 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 SPOCK1Q08629 439 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 SLC10A1Q14973 349 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 IAH1Q2TAA2 248 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 PLPPR5Q32ZL2 321 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 SLC25A53Q5H9E4 307 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 GFI1BQ5VTD9 330 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 OR52N5Q8NH56 324 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 SLC25A43Q8WUT9 341 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 EMG1Q92979 244 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 NKX3-1Q99801 234 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 SPEGQ15772 3267 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 E5RGE8 158 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 CYB5BO43169 146 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 RAMP1O60894 148 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 DKK1O94907 266 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 TRGC2P03986 189 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 TRGC1P0CF51 173 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 RPS2P15880 293 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 HSF1Q00613 529 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 TLE3Q04726 772 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 FMODQ06828 376 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 UNC119Q13432 240 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 FAM189A2Q15884 450 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 GPR157Q5UAW9 335 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 DNM1P34Q6PK57 102 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 SLC35E3Q7Z769 313 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 MRPL52Q86TS9 123 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 C1orf87Q8N0U7 546 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 SLC26A10Q8NG04 563 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 OR13C9Q8NGT0 318 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 FNDC9Q8TBE3 224 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 POC1BQ8TC44 478 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 CMBLQ96DG6 245 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 TVP23CQ96ET8 276 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 MRGPRX4Q96LA9 322 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 KCNK17Q96T54 332 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 METTL7AQ9H8H3 244 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 ALKBH4Q9NXW9 302 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 NSG2Q9Y328 171 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 LRP12Q9Y561 859 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 B3GALT1Q9Y5Z6 326 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 R4GMQ9 66 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 RALGAPA1Q6GYQ0 2036 aa12.23□□□□□ -0.45
RABGGTA-220ENST00000560998 VCANP13611 3396 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 PHOX2AO14813 284 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 GPR137BO60478 399 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 GCGP01275 180 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 OR5AC1P0C628 307 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 GNB3P16520 340 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 POU3F1Q03052 451 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 GAGE1Q13065 139 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 IL11RAQ14626 422 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 PEAR1Q5VY43 1037 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 TMEM183AQ8IXX5 376 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 SLC22A24Q8N4F4 322 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 OR5H2Q8NGV7 314 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 PPP1R14AQ96A00 147 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 CRLF2Q9HC73 371 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 OSGIN2Q9Y236 505 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 HS3ST3B1Q9Y662 390 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 MYO15AQ9UKN7 3530 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 WDR87Q6ZQQ6 2873 aa12.22□□□□□ -0.45
RABGGTA-220ENST00000560998 A0A087WZY1 265 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 LOC107986453A0A1B0GWG9 222 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 RBFOX3A6NFN3 312 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 H3BML4 177 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 K7N7A8 449 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 HSD17B6O14756 317 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 GDF9O60383 454 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 SRSF10O75494 262 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 IFNA21P01568 189 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 GZMBP10144 247 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 RBMXP38159 391 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 TAS2R46P59540 309 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 ERVFRD-1P60508 538 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 H3F3AP84243 136 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms