RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 MARS2Q96GW9 593 aaKnown RBP16■□□□□ 0.15
PRPF40B-208ENST00000548436 TECTBQ96PL2 329 aa16■□□□□ 0.15
PRPF40B-208ENST00000548436 BARX1Q9HBU1 254 aaPredicted RBP16■□□□□ 0.15
PRPF40B-208ENST00000548436 ACKR4Q9NPB9 350 aa16■□□□□ 0.15
PRPF40B-208ENST00000548436 OR5AC2Q9NZP5 309 aa16■□□□□ 0.15
PRPF40B-208ENST00000548436 CRIM1Q9NZV1 1036 aa16■□□□□ 0.15
PRPF40B-208ENST00000548436 TEX13DA0A0J9YY54 714 aaPredicted RBP15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 C5orf49A4QMS7 147 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 ZNF724A8MTY0 619 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 NME2P1O60361 137 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 IFNA2P01563 188 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 NME2P22392 152 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 ECI1P42126 302 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 ATP1A1-AS1Q5TC04 95 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 ZNF611Q8N823 705 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 OR56B2PQ8NGI1 322 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 C2orf50Q96LR7 162 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 REPIN1Q9BWE0 567 aaKnown RBP15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 LIPGQ9Y5X9 500 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 TNRC6AQ8NDV7 1962 aaKnown RBP15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 CTSDP07339 412 aaPredicted RBP15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 LYL1P12980 280 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 M6PRP20645 277 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 NUP62P37198 522 aaPredicted RBP15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 NPBWR2P48146 333 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 PPIAP62937 165 aaKnown RBP15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 IL15RAQ13261 267 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 STK11Q15831 433 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 NUFIP2Q7Z417 695 aaKnown RBP15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 POC1AQ8NBT0 407 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 APH1AQ96BI3 265 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 PIK3IP1Q96FE7 263 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 FGF23Q9GZV9 251 aaPredicted RBP15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 NECAP2Q9NVZ3 263 aa15.99■□□□□ 0.15
PRPF40B-208ENST00000548436 MSGN1A6NI15 193 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 RBM11P57052 281 aaKnown RBP15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 RAB32Q13637 225 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 SNTB1Q13884 538 aaKnown RBP15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 PRSS54Q6PEW0 395 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 DHRS11Q6UWP2 260 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 Q6ZPA2 131 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 SLC25A26Q70HW3 274 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 EIF4E3Q8N5X7 224 aaKnown RBP15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 IL22RA1Q8N6P7 574 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 FER1L6-AS2Q96M78 137 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 RNF122Q9H9V4 155 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 TMEM9BQ9NQ34 198 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 COQ3Q9NZJ6 369 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 KLF13Q9Y2Y9 288 aaPredicted RBP15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 SHANK1Q9Y566 2161 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 CRYM-AS1A6NIL9 109 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 F8VVB4 439 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 F8VWA3 439 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 ZNF806P0C7X5 589 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 CD79AP11912 226 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 PAN3Q58A45 887 aaKnown RBP15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 GALNT11Q8NCW6 608 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 IP6K3Q96PC2 410 aa15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 PAPOLGQ9BWT3 736 aaKnown RBP15.98■□□□□ 0.15
PRPF40B-208ENST00000548436 PDCD6O75340 191 aa15.97■□□□□ 0.15
PRPF40B-208ENST00000548436 RBM39Q14498 530 aaKnown RBP15.97■□□□□ 0.15
PRPF40B-208ENST00000548436 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.97■□□□□ 0.15
PRPF40B-208ENST00000548436 SGPP2Q8IWX5 399 aa15.97■□□□□ 0.15
PRPF40B-208ENST00000548436 CYTL1Q9NRR1 136 aa15.97■□□□□ 0.15
PRPF40B-208ENST00000548436 C1orf123Q9NWV4 160 aa15.97■□□□□ 0.15
PRPF40B-208ENST00000548436 GSKIPQ9P0R6 139 aa15.97■□□□□ 0.15
PRPF40B-208ENST00000548436 PQLC2LA1A4F0 135 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 KRBOX1C9JBD0 128 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 KLRC4-KLRK1H3BQV0 150 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 COX5BP10606 129 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 RBMXP38159 391 aaKnown RBP15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 RAB1AP62820 205 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 MALLQ13021 153 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 PRDX4Q13162 271 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 PLEKHN1Q494U1 663 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 SLC22A25Q6T423 547 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 STPG2Q8N412 459 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 STOML3Q8TAV4 291 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 ZNF629Q9UEG4 869 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 ARID1AO14497 2285 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 B8ZZF3 427 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 NGFP01138 241 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 SLC10A1Q14973 349 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 RNPS1Q15287 305 aaKnown RBP15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 C17orf50Q8WW18 174 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 HPSE2Q8WWQ2 592 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 TOMM40LQ969M1 308 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 PCDHB16Q9NRJ7 776 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 STARD10Q9Y365 291 aa15.96■□□□□ 0.15
PRPF40B-208ENST00000548436 FAM186AA6NE01 2351 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 SS18L1O75177 396 aaPredicted RBP15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 PIGPP57054 158 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 TGIF1Q15583 401 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 ELP2Q6IA86 826 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 ZFP62Q8NB50 900 aaPredicted RBP15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 APOBEC3DQ96AK3 386 aaPredicted RBP15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 POM121L2Q96KW2 1035 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 DEFB127Q9H1M4 99 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 PRSS50Q9UI38 385 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 OR7C1O76099 320 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms