RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 MEGF9Q9H1U4 602 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 NECAP2Q9NVZ3 263 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 AURKAIP1Q9NWT8 199 aaPredicted RBP13.19□□□□□ -0.3
DDX55-212ENST00000544738 GNG8Q9UK08 70 aa13.19□□□□□ -0.3
DDX55-212ENST00000544738 K7N7A8 449 aa13.18□□□□□ -0.3
DDX55-212ENST00000544738 CHRM2P08172 466 aa13.18□□□□□ -0.3
DDX55-212ENST00000544738 CEBPDP49716 269 aaPredicted RBP13.18□□□□□ -0.3
DDX55-212ENST00000544738 ACTC1P68032 377 aa13.18□□□□□ -0.3
DDX55-212ENST00000544738 ACTA1P68133 377 aa13.18□□□□□ -0.3
DDX55-212ENST00000544738 CNN3Q15417 329 aaKnown RBP13.18□□□□□ -0.3
DDX55-212ENST00000544738 UBE2V2Q15819 145 aa13.18□□□□□ -0.3
DDX55-212ENST00000544738 AANATQ16613 207 aa13.18□□□□□ -0.3
DDX55-212ENST00000544738 SLC25A30Q5SVS4 291 aa13.18□□□□□ -0.3
DDX55-212ENST00000544738 MEDAGQ5VYS4 303 aa13.18□□□□□ -0.3
DDX55-212ENST00000544738 OR4M1Q8NGD0 313 aa13.18□□□□□ -0.3
DDX55-212ENST00000544738 BORCS8Q96FH0 119 aa13.18□□□□□ -0.3
DDX55-212ENST00000544738 HRASLS5Q96KN8 279 aa13.18□□□□□ -0.3
DDX55-212ENST00000544738 SSX3Q99909 188 aa13.18□□□□□ -0.3
DDX55-212ENST00000544738 TET2Q6N021 2002 aaPredicted RBP13.18□□□□□ -0.3
DDX55-212ENST00000544738 SNTNA6NMZ2 147 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 H3BUX3 64 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 ALPLP05186 524 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 LGALS4P56470 323 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 ERVFRD-1P60508 538 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 ISL1P61371 349 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 ZNF85Q03923 595 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 TMEM244Q5VVB8 128 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 Q6ZTK2 550 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 Q8IYB0 196 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 C10orf67Q8IYJ2 551 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 C11orf42Q8N5U0 333 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 ASCC1Q8N9N2 400 aaKnown RBP13.17□□□□□ -0.3
DDX55-212ENST00000544738 PYDC1Q8WXC3 89 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 MTCH1Q9NZJ7 389 aa13.17□□□□□ -0.3
DDX55-212ENST00000544738 LOC107986453A0A1B0GWG9 222 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 DAPL1A0PJW8 107 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 H3BSH0 61 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 ATP1B3P54709 279 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 SNRPGP62308 76 aaKnown RBP13.16□□□□□ -0.3
DDX55-212ENST00000544738 COL10A1Q03692 680 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 LRRC75BQ2VPJ9 315 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 TP53I3Q53FA7 332 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 ZFP1Q6P2D0 407 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 CCBE1Q6UXH8 406 aaPredicted RBP13.16□□□□□ -0.3
DDX55-212ENST00000544738 SLC25A26Q70HW3 274 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 GDPD3Q7L5L3 318 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 EGFL6Q8IUX8 553 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 ENTHD1Q8IYW4 607 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 BATF2Q8N1L9 274 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 PRSS35Q8N3Z0 413 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 C11orf44Q8N8P7 122 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 DTX3Q8N9I9 347 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 DNAAF1Q8NEP3 725 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 MYCBPQ99417 103 aaPredicted RBP13.16□□□□□ -0.3
DDX55-212ENST00000544738 PPA2Q9H2U2 334 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 SEBOXQ9HB31 216 aaPredicted RBP13.16□□□□□ -0.3
DDX55-212ENST00000544738 RAB18Q9NP72 206 aa13.16□□□□□ -0.3
DDX55-212ENST00000544738 IGKV1-27A0A075B6S5 117 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 C17orf98A8MV24 154 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 EI24O14681 340 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 ENTPD6O75354 484 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 ZNF737O75373 536 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 CYB5AP00167 134 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 RBP4P02753 201 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 ISG15P05161 165 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 CCL3L1P16619 93 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 PRKACBP22694 351 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 KIR3DL2P43630 455 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 RBP2P50120 134 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 ALDH3A2P51648 485 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 MEF2CQ06413 473 aaPredicted RBP13.15□□□□□ -0.3
DDX55-212ENST00000544738 SLC35E4Q6ICL7 350 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 FDX2Q6P4F2 183 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 OR2G2Q8NGZ5 317 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 C17orf50Q8WW18 174 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 SLAMF9Q96A28 289 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 MRPL48Q96GC5 212 aaKnown RBP13.15□□□□□ -0.3
DDX55-212ENST00000544738 AJUBAQ96IF1 538 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 SNX22Q96L94 193 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 FBLN5Q9UBX5 448 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 DNAH9Q9NYC9 4486 aa13.15□□□□□ -0.3
DDX55-212ENST00000544738 SLC16A6O15403 523 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 MPIG6BO95866 241 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 ZNF728P0DKX0 622 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 PIPP12273 146 aaPredicted RBP13.14□□□□□ -0.31
DDX55-212ENST00000544738 ZNF20P17024 532 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 CCR9P51686 369 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 EDDM3BP56851 147 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 ZNF273Q14593 569 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 HERPUD1Q15011 391 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 C11orf88Q6PI97 169 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 LIAT1Q6ZQX7 453 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 UTS2BQ765I0 119 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 RDH10Q8IZV5 341 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 OR8H2Q8N162 312 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 ACBD7Q8N6N7 88 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 OR13D1Q8NGV5 346 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 RNFT2Q96EX2 444 aa13.14□□□□□ -0.31
DDX55-212ENST00000544738 F8VVB4 439 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 F8VWA3 439 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms