RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SPRY1O43609 319 aaPredicted RBP18.81■□□□□ 0.6
SFSWAP-204ENST00000535399 INMTO95050 263 aa18.81■□□□□ 0.6
SFSWAP-204ENST00000535399 ECDO95905 644 aaPredicted RBP18.81■□□□□ 0.6
SFSWAP-204ENST00000535399 KNG1P01042 644 aa18.81■□□□□ 0.6
SFSWAP-204ENST00000535399 IGKV1D-12P01611 117 aa18.81■□□□□ 0.6
SFSWAP-204ENST00000535399 HCKP08631 526 aa18.81■□□□□ 0.6
SFSWAP-204ENST00000535399 PRDX2P32119 198 aa18.81■□□□□ 0.6
SFSWAP-204ENST00000535399 NPBWR2P48146 333 aa18.81■□□□□ 0.6
SFSWAP-204ENST00000535399 Q499Y3 187 aa18.81■□□□□ 0.6
SFSWAP-204ENST00000535399 METRNQ9UJH8 293 aa18.81■□□□□ 0.6
SFSWAP-204ENST00000535399 GPR37O15354 613 aa18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 ANGPTL7O43827 346 aa18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 IGFBP3P17936 291 aaPredicted RBP18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 BCL3P20749 454 aa18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 CEBPDP49716 269 aaPredicted RBP18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 ZP1P60852 638 aa18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 KISS1Q15726 138 aa18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 ZNRF1Q8ND25 227 aa18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 OR5D18Q8NGL1 313 aa18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 NANPQ8TBE9 248 aa18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 ORAI1Q96D31 301 aa18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 CCDC90BQ9GZT6 254 aa18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 RBFOX1Q9NWB1 397 aaKnown RBP18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 SLC25A10Q9UBX3 287 aaPredicted RBP18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 RPUSD1Q9UJJ7 312 aaKnown RBP18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 BLOC1S6Q9UL45 172 aa18.8■□□□□ 0.6
SFSWAP-204ENST00000535399 RRP9O43818 475 aaKnown RBP18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 CYB5AP00167 134 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 ALDOBP05062 364 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 LIPFP07098 398 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 CAV3P56539 151 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 MED22Q15528 200 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 KRTAP21-3Q3LHN1 58 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 Q8IYB0 196 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 SAXO1Q8IYX7 474 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 ZSCAN4Q8NAM6 433 aaPredicted RBP18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 LY6G5BQ8NDX9 201 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 OR52N4Q8NGI2 321 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 OR14A2Q96R54 314 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 IL36RNQ9UBH0 155 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 CUBNO60494 3623 aa18.79■□□□□ 0.6
SFSWAP-204ENST00000535399 DOCK11Q5JSL3 2073 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 ZNF879B4DU55 563 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 GPX5O75715 221 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 KDM4BO94953 1096 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 IFNA2P01563 188 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 PPIAL4GP0DN37 164 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 MAP2K4P45985 399 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 FGF12P61328 243 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 PPP3R1P63098 170 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 KLF17Q5JT82 389 aaPredicted RBP18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 ZNF561Q8N587 486 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 PNLDC1Q8NA58 520 aaKnown RBP18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 EMG1Q92979 244 aaKnown RBP18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 UPRTQ96BW1 309 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 DERL3Q96Q80 235 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 DCTN5Q9BTE1 182 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 TMEM138Q9NPI0 162 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 OR14J1Q9UGF5 321 aa18.78■□□□□ 0.6
SFSWAP-204ENST00000535399 TRAV8-7A0A075B6U6 113 aa18.77■□□□□ 0.6
SFSWAP-204ENST00000535399 PIN1P1O15428 100 aa18.77■□□□□ 0.6
SFSWAP-204ENST00000535399 MAGEB3O15480 346 aa18.77■□□□□ 0.6
SFSWAP-204ENST00000535399 FSTP19883 344 aa18.77■□□□□ 0.6
SFSWAP-204ENST00000535399 EEF1B2P24534 225 aaKnown RBP18.77■□□□□ 0.6
SFSWAP-204ENST00000535399 FAM58AQ8N1B3 248 aa18.77■□□□□ 0.6
SFSWAP-204ENST00000535399 TMEM185AQ8NFB2 350 aa18.77■□□□□ 0.6
SFSWAP-204ENST00000535399 C8orf46Q8TAG6 207 aa18.77■□□□□ 0.6
SFSWAP-204ENST00000535399 CNTD2Q9H8S5 307 aa18.77■□□□□ 0.6
SFSWAP-204ENST00000535399 ELL3Q9HB65 397 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-204ENST00000535399 ISYNA1Q9NPH2 558 aa18.77■□□□□ 0.6
SFSWAP-204ENST00000535399 A0A1W2PPK0 400 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 GABRPO00591 440 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 SFTPBP07988 381 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 TMEM225BP0DP42 221 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 CALCBP10092 127 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 MMP9P14780 707 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 NDUFB7P17568 137 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 EPHA1P21709 976 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 GABARAPL2P60520 117 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 GPR50Q13585 617 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 TBCEQ15813 527 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 SATL1Q86VE3 508 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 MS4A15Q8N5U1 240 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 H1FXQ92522 213 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 SEBOXQ9HB31 216 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 HMG20AQ9NP66 347 aa18.76■□□□□ 0.59
SFSWAP-204ENST00000535399 PRKACAP17612 351 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 BDKRB2P30411 391 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 TGFBR2P37173 567 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 COL10A1Q03692 680 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 TPBGQ13641 420 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 INSL4Q14641 139 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 ZNF146Q15072 292 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 ARMCX4Q5H9R4 360 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 DDI2Q5TDH0 399 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 UNQ9370/PRO34162Q6UXP9 181 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 PXT1Q8NFP0 134 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 UFD1Q92890 307 aa18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 CPNE2Q96FN4 548 aaPredicted RBP18.75■□□□□ 0.59
SFSWAP-204ENST00000535399 DMRTB1Q96MA1 342 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms