RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 DPM3Q9P2X0 92 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 DNAH1Q9P2D7 4330 aa16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 hADV38S2A0JD32 116 aa16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 FAM172BPA6NC97 362 aa16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 RAMP3O60896 148 aa16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 IGLV3-1P01715 115 aa16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 ATP6V1B1P15313 513 aa16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 ALOX5APP20292 161 aa16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 LUMP51884 338 aaPredicted RBP16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 MEF2CQ06413 473 aaPredicted RBP16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 KCTD18Q6PI47 426 aaPredicted RBP16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 NOL4LQ96MY1 436 aaPredicted RBP16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 CHST6Q9GZX3 395 aa16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 LAMP5Q9UJQ1 280 aa16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 U3KQV3 271 aa16.09■□□□□ 0.17
SQSTM1-215ENST00000514093 MPZP25189 248 aa16.08■□□□□ 0.16
SQSTM1-215ENST00000514093 ESRRGP62508 458 aa16.08■□□□□ 0.16
SQSTM1-215ENST00000514093 CLVS2Q5SYC1 327 aa16.08■□□□□ 0.16
SQSTM1-215ENST00000514093 ZBTB49Q6ZSB9 765 aa16.08■□□□□ 0.16
SQSTM1-215ENST00000514093 ABHD12Q8N2K0 398 aa16.08■□□□□ 0.16
SQSTM1-215ENST00000514093 TEX47Q8TBZ9 253 aa16.08■□□□□ 0.16
SQSTM1-215ENST00000514093 TTTY10Q9BZA0 68 aa16.08■□□□□ 0.16
SQSTM1-215ENST00000514093 LINC00527Q9UJ94 153 aa16.08■□□□□ 0.16
SQSTM1-215ENST00000514093 PRR23D1E9PI22 279 aaPredicted RBP16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 H3BN98 237 aa16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 DHRS3O75911 302 aa16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 PRR23D2P0DMB1 279 aaPredicted RBP16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 OR3A4PP47883 348 aa16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 MFGE8Q08431 387 aaPredicted RBP16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 SNAPC1Q16533 368 aa16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 HDXQ7Z353 690 aa16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 BBS1Q8NFJ9 593 aa16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 OR52N4Q8NGI2 321 aa16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 TRMT10AQ8TBZ6 339 aaKnown RBP16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 SNX22Q96L94 193 aa16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 NIPSNAP1Q9BPW8 284 aa16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 DGCR6LQ9BY27 220 aa16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 PAPOLBQ9NRJ5 636 aaKnown RBP16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 HHLA2Q9UM44 414 aa16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 LINC00312Q9Y6C7 94 aa16.07■□□□□ 0.16
SQSTM1-215ENST00000514093 ACOD1A6NK06 481 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 PRR32B1ATL7 298 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 IGHA1P01876 353 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 HSD17B1P14061 328 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 ECI1P42126 302 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 GRK1Q15835 563 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 MICAQ29983 383 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 PRAMEF5Q5TYX0 476 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 TMEM42Q69YG0 159 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 TRAPPC6BQ86SZ2 158 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 CMTM5Q96DZ9 223 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 RAX2Q96IS3 184 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 CDRT15Q96T59 188 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 MTCH1Q9NZJ7 389 aa16.06■□□□□ 0.16
SQSTM1-215ENST00000514093 FAM230AA0A1W2PPH8 454 aa16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 LEUTXA8MZ59 168 aa16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 DLGAP1O14490 977 aa16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 TTRP02766 147 aa16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 GABRR1P24046 479 aa16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 RPS7P62081 194 aaKnown RBP16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 BDH1Q02338 343 aa16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 IL24Q13007 206 aa16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 SLAMF9Q96A28 289 aa16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 MROQ9BYG7 248 aa16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 ZFP57Q9NU63 452 aa16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 IL36RNQ9UBH0 155 aa16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 GTF2A1LQ9UNN4 478 aa16.05■□□□□ 0.16
SQSTM1-215ENST00000514093 LCE6AA0A183 80 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 ARRDC5A6NEK1 342 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 ARHGDIBP52566 201 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 DOC2BQ14184 412 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 LCN1P1Q5VSP4 162 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 CYP2R1Q6VVX0 501 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 CPOQ8IVL8 374 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 ZNF695Q8IW36 515 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 ZNF596Q8TC21 504 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 ITFG2Q969R8 447 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 CEP19Q96LK0 163 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 CADM1Q9BY67 442 aaKnown RBP16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 PKIBQ9C010 78 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 NUFIP1Q9UHK0 495 aaKnown RBP16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 LYSTQ99698 3801 aa16.04■□□□□ 0.16
SQSTM1-215ENST00000514093 M0QZK8 103 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 CCL24O00175 119 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 PSPNO60542 156 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 HAND1O96004 215 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 IGLV1-47P01700 117 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 MRPL3P09001 348 aaKnown RBP16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 CDK2P24941 298 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 PEX2P28328 305 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 DUSP1P28562 367 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 GDNFP39905 211 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 DEGS2Q6QHC5 323 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 EGFL6Q8IUX8 553 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 Q8NFD4 153 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 OR14K1Q8NGZ2 314 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 MYLK2Q9H1R3 596 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 ZNF286AQ9HBT8 521 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 MOB4Q9Y3A3 225 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 SAMHD1Q9Y3Z3 626 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms