RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 PSPNO60542 156 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 BAG2O95816 211 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 KNG1P01042 644 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 UBCP0CG48 685 aaKnown RBP10.26□□□□□ -0.77
HSPG2-212ENST00000493940 LIMS3P0CW19 117 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 LIMS4P0CW20 117 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 ATF1P18846 271 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 BMXP51813 675 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 RAG2P55895 527 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 RPL31P62899 125 aaKnown RBP10.26□□□□□ -0.77
HSPG2-212ENST00000493940 ALKBH1Q13686 389 aaKnown RBP10.26□□□□□ -0.77
HSPG2-212ENST00000493940 GALEQ14376 348 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 TMEM244Q5VVB8 128 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 LPCAT4Q643R3 524 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 HIST2H2BDQ6DRA6 164 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 SHISA2Q6UWI4 295 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 Q6ZSV7 163 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 CMTM4Q8IZR5 234 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 TPRX1Q8N7U7 411 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 LINC01006Q8NI28 216 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 CEP19Q96LK0 163 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 ADI1Q9BV57 179 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 ALG8Q9BVK2 526 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 METTL8Q9H825 291 aaKnown RBP10.26□□□□□ -0.77
HSPG2-212ENST00000493940 PLEKHA1Q9HB21 404 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 MRPS18AQ9NVS2 196 aaKnown RBP10.26□□□□□ -0.77
HSPG2-212ENST00000493940 RBFOX1Q9NWB1 397 aaKnown RBP10.26□□□□□ -0.77
HSPG2-212ENST00000493940 ERVK13-1Q9NX77 482 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 SLC7A11Q9UPY5 501 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 POLDIP2Q9Y2S7 368 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 ORC6Q9Y5N6 252 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 MMP24Q9Y5R2 645 aa10.26□□□□□ -0.77
HSPG2-212ENST00000493940 TRBV23-1A0A0A0MS06 115 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 POM121CA8CG34 1229 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 NDUFA7O95182 113 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 HTR1AP08908 422 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 AZGP1P25311 298 aaKnown RBP10.25□□□□□ -0.77
HSPG2-212ENST00000493940 CCR9P51686 369 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 SNU13P55769 128 aaKnown RBP10.25□□□□□ -0.77
HSPG2-212ENST00000493940 DOC2BQ14184 412 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 LRRC36Q1X8D7 754 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 BAIAP2L2Q6UXY1 529 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 ZNF782Q6ZMW2 699 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-212ENST00000493940 UTS2BQ765I0 119 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 FAM220AQ7Z4H9 259 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 KCTD20Q7Z5Y7 419 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 LHFPL4Q7Z7J7 247 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 EGFL6Q8IUX8 553 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 PPP1R35Q8TAP8 253 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 TBC1D15Q8TC07 691 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 PIFOQ8TCI5 191 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 WFDC12Q8WWY7 111 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 RGP1Q92546 391 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-212ENST00000493940 DYRK2Q92630 601 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 BORCS8Q96FH0 119 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 NKX3-1Q99801 234 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-212ENST00000493940 PDCD1LG2Q9BQ51 273 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 ZNF696Q9H7X3 374 aa10.25□□□□□ -0.77
HSPG2-212ENST00000493940 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-212ENST00000493940 SIRT4Q9Y6E7 314 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-212ENST00000493940 C17orf98A8MV24 154 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 ANKRD65E5RJM6 399 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 SLC1A7O00341 560 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 ZFPL1O95159 310 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 LALBAP00709 142 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 JUNBP17275 347 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-212ENST00000493940 POU3F4P49335 361 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 RBP2P50120 134 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 ETV1P50549 477 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 MTCP1P56278 107 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 ACTC1P68032 377 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 ACTA1P68133 377 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 GUCA2AQ02747 115 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 PDZK1IP1Q13113 114 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 OLFML2AQ68BL7 652 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 LAIR2Q6ISS4 152 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 ASCC1Q8N9N2 400 aaKnown RBP10.24□□□□□ -0.77
HSPG2-212ENST00000493940 ZSCAN4Q8NAM6 433 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-212ENST00000493940 DNAAF1Q8NEP3 725 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 OR4S1Q8NGB4 309 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 OR5D18Q8NGL1 313 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 OR13C9Q8NGT0 318 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 CNIH3Q8TBE1 160 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 PP6455Q8WZ26 134 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 C10orf35Q96D05 121 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 CHST6Q9GZX3 395 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 SLITRK2Q9H156 845 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 MEGF9Q9H1U4 602 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 FAM96BQ9Y3D0 163 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 NOTCH1P46531 2555 aa10.24□□□□□ -0.77
HSPG2-212ENST00000493940 TET2Q6N021 2002 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-212ENST00000493940 CLPSL1A2RUU4 121 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 GATBO75879 557 aaKnown RBP10.23□□□□□ -0.77
HSPG2-212ENST00000493940 MMP23AO75900 390 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 CHRM2P08172 466 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 FBP1P09467 338 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 COX7A1P24310 79 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 RAB13P51153 203 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 ATP1B3P54709 279 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 PROK1P58294 105 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms