RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 DSCAML1Q8TD84 2053 aa14.06□□□□□ -0.16
NUP50-218ENST00000493456 M0QZK8 103 aa14.06□□□□□ -0.16
NUP50-218ENST00000493456 ZNF254O75437 659 aa14.06□□□□□ -0.16
NUP50-218ENST00000493456 SASH3O75995 380 aa14.06□□□□□ -0.16
NUP50-218ENST00000493456 DGCR2P98153 550 aa14.06□□□□□ -0.16
NUP50-218ENST00000493456 OR10G2Q8NGC3 310 aa14.06□□□□□ -0.16
NUP50-218ENST00000493456 SNX22Q96L94 193 aa14.06□□□□□ -0.16
NUP50-218ENST00000493456 CDRT15Q96T59 188 aa14.06□□□□□ -0.16
NUP50-218ENST00000493456 YIPF3Q9GZM5 350 aa14.06□□□□□ -0.16
NUP50-218ENST00000493456 MAGIXQ9H6Y5 334 aa14.06□□□□□ -0.16
NUP50-218ENST00000493456 GPR173Q9NS66 373 aa14.06□□□□□ -0.16
NUP50-218ENST00000493456 DPM3Q9P2X0 92 aa14.06□□□□□ -0.16
NUP50-218ENST00000493456 PSMD9O00233 223 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 ZFPL1O95159 310 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 CCDC159P0C7I6 412 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 ROM1Q03395 351 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 GK3PQ14409 553 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 EDDM3AQ14507 147 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 OR2T5Q6IEZ7 315 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 ZNF679Q8IYX0 411 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 OR2T29Q8NH02 315 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 ZNF596Q8TC21 504 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 LYSTQ99698 3801 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 MOB1AQ9H8S9 216 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 VNN3Q9NY84 501 aa14.05□□□□□ -0.16
NUP50-218ENST00000493456 HUWE1Q7Z6Z7 4374 aaKnown RBP14.04□□□□□ -0.16
NUP50-218ENST00000493456 PSMB11A5LHX3 300 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 DHRS7CA6NNS2 312 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 H0YHG0 523 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 RAMP3O60896 148 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 AMY1AP04745 511 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 AMY2AP04746 511 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 HMGN1P05114 100 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 CD24P25063 80 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 RIDAP52758 137 aaKnown RBP14.04□□□□□ -0.16
NUP50-218ENST00000493456 RPS7P62081 194 aaKnown RBP14.04□□□□□ -0.16
NUP50-218ENST00000493456 ESRRGP62508 458 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 RPL23AP62750 156 aaKnown RBP14.04□□□□□ -0.16
NUP50-218ENST00000493456 BDH1Q02338 343 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 RTN4RL2Q86UN3 420 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 ASB17Q8WXJ9 295 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 PCDHGB5Q9Y5G0 923 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 V9GYS6 101 aa14.04□□□□□ -0.16
NUP50-218ENST00000493456 ARRDC5A6NEK1 342 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 E2F6O75461 281 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 TTRP02766 147 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 SLC2A5P22732 501 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 PEX2P28328 305 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 MYCNOSP40205 109 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 HCCSP53701 268 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 GRK1Q15835 563 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 SNAPC1Q16533 368 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 OR52W1Q6IF63 320 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 CYP2R1Q6VVX0 501 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 ANGPTL5Q86XS5 388 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 CPOQ8IVL8 374 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 ABHD12Q8N2K0 398 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 BCAS4Q8TDM0 211 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 CREB3L1Q96BA8 519 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 CEP19Q96LK0 163 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 SEBOXQ9HB31 216 aaPredicted RBP14.03□□□□□ -0.16
NUP50-218ENST00000493456 PAPOLBQ9NRJ5 636 aaKnown RBP14.03□□□□□ -0.16
NUP50-218ENST00000493456 ACTR3BQ9P1U1 418 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 TMEM14AQ9Y6G1 99 aa14.03□□□□□ -0.16
NUP50-218ENST00000493456 TMEM82A0PJX8 343 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 LEUTXA8MZ59 168 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 ATP6V1B2P21281 511 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 CEACAM3P40198 252 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 GP2P55259 537 aaKnown RBP14.02□□□□□ -0.17
NUP50-218ENST00000493456 CBX1P83916 185 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 MFGE8Q08431 387 aaPredicted RBP14.02□□□□□ -0.17
NUP50-218ENST00000493456 GINS1Q14691 196 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 C9orf152Q5JTZ5 239 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 SLX4IPQ5VYV7 408 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 OR2W3Q7Z3T1 314 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 TPRX1Q8N7U7 411 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 BBS1Q8NFJ9 593 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 FEVQ99581 238 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 ZFP57Q9NU63 452 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 NDE1Q9NXR1 346 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 MTCH1Q9NZJ7 389 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 HHLA2Q9UM44 414 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 SLC7A11Q9UPY5 501 aa14.02□□□□□ -0.17
NUP50-218ENST00000493456 UBE2J1Q9Y385 318 aaPredicted RBP14.02□□□□□ -0.17
NUP50-218ENST00000493456 SH2D7A6NKC9 451 aaPredicted RBP14.01□□□□□ -0.17
NUP50-218ENST00000493456 LOC110117498-PIK3R3F6TDL0 507 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 GABRR1P24046 479 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 ERP29P30040 261 aaKnown RBP14.01□□□□□ -0.17
NUP50-218ENST00000493456 APOFQ13790 326 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 BCL2L15Q5TBC7 163 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 CCDC144NLQ6NUI1 221 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 C16orf89Q6UX73 402 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 Q6ZSR3 168 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 C8orf86Q6ZUL3 223 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 TRAPPC6BQ86SZ2 158 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 ENTHD1Q8IYW4 607 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 OR14K1Q8NGZ2 314 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 GIPC3Q8TF64 312 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 TFAP2CQ92754 450 aa14.01□□□□□ -0.17
NUP50-218ENST00000493456 P2RX4Q99571 388 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms