RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 IL13RA2Q14627 380 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 KIR2DS1Q14954 304 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 MSMPQ1L6U9 139 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 SNAI3Q3KNW1 292 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 C4orf46Q504U0 113 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 OTPQ5XKR4 325 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF626Q68DY1 528 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 SFRP4Q6FHJ7 346 aaPredicted RBP5.49□□□□□ -1.53
SF3A3-208ENST00000489537 MOB1BQ7L9L4 216 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 HOGA1Q86XE5 327 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 CNEP1R1Q8N9A8 125 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 CPEB3Q8NE35 698 aaKnown RBP5.49□□□□□ -1.53
SF3A3-208ENST00000489537 OR5AP2Q8NGF4 316 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 OR51S1Q8NGJ8 323 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 TERB2Q8NHR7 220 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 FAM57AQ8TBR7 257 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF431Q8TF32 576 aaPredicted RBP5.49□□□□□ -1.53
SF3A3-208ENST00000489537 PIGCQ92535 297 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 EXTL1Q92935 676 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 EMG1Q92979 244 aaKnown RBP5.49□□□□□ -1.53
SF3A3-208ENST00000489537 MUCL1Q96DR8 90 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 LRRC46Q96FV0 321 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF486Q96H40 463 aaPredicted RBP5.49□□□□□ -1.53
SF3A3-208ENST00000489537 Q96M66 194 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 C1orf147Q96MC9 270 aaPredicted RBP5.49□□□□□ -1.53
SF3A3-208ENST00000489537 PHB2Q99623 299 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 C12orf49Q9H741 205 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 IFT22Q9H7X7 185 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 GPR173Q9NS66 373 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 ZFP57Q9NU63 452 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF69Q9UC07 566 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 SHPKQ9UHJ6 478 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF222Q9UK12 451 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 LIPGQ9Y5X9 500 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 NPTNQ9Y639 398 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 CACNA1CQ13936 2221 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 HECTD1Q9ULT8 2610 aa5.49□□□□□ -1.53
SF3A3-208ENST00000489537 NBASA2RRP1 2371 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 DOCK10Q96BY6 2186 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 LOC100509620A0A075B734 347 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 LRP5LA4QPB2 252 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 RGS13O14921 159 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 SSX4O60224 188 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 LMX1BO60663 402 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 B3GALNT1O75752 331 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 IGKV3-15P01624 115 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 IGHV3-9P01782 118 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 PET100P0DJ07 73 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 TMIGD3P0DMS9 266 aaPredicted RBP5.48□□□□□ -1.53
SF3A3-208ENST00000489537 PPP3CBP16298 524 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF14P17017 642 aaPredicted RBP5.48□□□□□ -1.53
SF3A3-208ENST00000489537 SERPINA2P20848 420 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 IL32P24001 234 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 FPR2P25090 351 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 ACKR3P25106 362 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 GCH1P30793 250 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 MDH2P40926 338 aaKnown RBP5.48□□□□□ -1.53
SF3A3-208ENST00000489537 GLP1RP43220 463 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 KIR2DL2P43627 348 aaPredicted RBP5.48□□□□□ -1.53
SF3A3-208ENST00000489537 KCNJ3P48549 501 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 ARPC4P59998 168 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 FGF12P61328 243 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 PPP1CBP62140 327 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 CD83Q01151 205 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 PRDX4Q13162 271 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 MADCAM1Q13477 382 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 TBR1Q16650 682 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 TMEM128Q5BJH2 165 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 RNASE12Q5GAN4 147 aaKnown RBP5.48□□□□□ -1.53
SF3A3-208ENST00000489537 TIMM23BQ5SRD1 257 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 SFRP5Q5T4F7 317 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 C1orf185Q5T7R7 199 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 Q6ZS49 121 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF767PQ75MW2 155 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 SLC25A42Q86VD7 318 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 FAM185AQ8N0U4 392 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 DTX3Q8N9I9 347 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 TMEM185AQ8NFB2 350 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 BEST4Q8NFU0 473 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 OR56B2PQ8NGI1 322 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 OR8S1Q8NH09 359 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 COQ8AQ8NI60 647 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 ST8SIA4Q92187 359 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 CMSS1Q9BQ75 279 aaKnown RBP5.48□□□□□ -1.53
SF3A3-208ENST00000489537 SYT3Q9BQG1 590 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 PECRQ9BY49 303 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF436Q9C0F3 470 aaPredicted RBP5.48□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF286AQ9HBT8 521 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 RAB9BQ9NP90 201 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 NGBQ9NPG2 151 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 C12orf4Q9NQ89 552 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 NECAP2Q9NVZ3 263 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 ELOVL5Q9NYP7 299 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 TREM2Q9NZC2 230 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 COMMD9Q9P000 198 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF629Q9UEG4 869 aaPredicted RBP5.48□□□□□ -1.53
SF3A3-208ENST00000489537 GPR160Q9UJ42 338 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 C14orf166Q9Y224 244 aaKnown RBP5.48□□□□□ -1.53
SF3A3-208ENST00000489537 KCNIP3Q9Y2W7 256 aa5.48□□□□□ -1.53
SF3A3-208ENST00000489537 MEMO1Q9Y316 297 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms