RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ZNF788Q6ZQV5 615 aa16.16■□□□□ 0.18
PCOLCE-208ENST00000487172 SLC36A1Q7Z2H8 476 aa16.16■□□□□ 0.18
PCOLCE-208ENST00000487172 OR5T2Q8NGG2 359 aa16.16■□□□□ 0.18
PCOLCE-208ENST00000487172 EMG1Q92979 244 aaKnown RBP16.16■□□□□ 0.18
PCOLCE-208ENST00000487172 KCTD7Q96MP8 289 aa16.16■□□□□ 0.18
PCOLCE-208ENST00000487172 S100A13Q99584 98 aa16.16■□□□□ 0.18
PCOLCE-208ENST00000487172 CHCHD6Q9BRQ6 235 aa16.16■□□□□ 0.18
PCOLCE-208ENST00000487172 FAM192AQ9GZU8 254 aa16.16■□□□□ 0.18
PCOLCE-208ENST00000487172 METTL9Q9H1A3 318 aa16.16■□□□□ 0.18
PCOLCE-208ENST00000487172 HMG20AQ9NP66 347 aa16.16■□□□□ 0.18
PCOLCE-208ENST00000487172 GHRLQ9UBU3 117 aa16.16■□□□□ 0.18
PCOLCE-208ENST00000487172 OTOGQ6ZRI0 2925 aa16.16■□□□□ 0.18
PCOLCE-208ENST00000487172 IGKV1D-17A0A075B6S4 117 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 ADAM20O43506 726 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 NPY4RP50391 375 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 GPR176Q14439 515 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 ZNF146Q15072 292 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 FIP1L1Q6UN15 594 aaKnown RBP16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 ZNF841Q6ZN19 808 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 NLRC3Q7RTR2 1065 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 BATF2Q8N1L9 274 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 OR8B3Q8NGG8 313 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 OR4D6Q8NGJ1 314 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 SDSLQ96GA7 329 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 OR8B2Q96RD0 313 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 GFI1Q99684 422 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 NKX3-1Q99801 234 aaPredicted RBP16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 PCDHB16Q9NRJ7 776 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 RBFOX1Q9NWB1 397 aaKnown RBP16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 ING4Q9UNL4 249 aa16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 MRPS28Q9Y2Q9 187 aaKnown RBP16.15■□□□□ 0.18
PCOLCE-208ENST00000487172 RFPL4AA6NLU0 287 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 A8MXK9 166 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 FAM157AC9JC47 383 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 RFPL4AL1F8VTS6 287 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 TMPRSS2O15393 492 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 AIREO43918 545 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 CDRT1O95170 752 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 IGHV4-31P0DP07 118 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 PRDX2P32119 198 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 RANBP1P43487 201 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 FGF12P61328 243 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 RSU1Q15404 277 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 SPIN3Q5JUX0 258 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 CYB5R2Q6BCY4 276 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 FAM166AQ6J272 317 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 TPRA1Q86W33 373 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 OR51T1Q8NGJ9 327 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 TBC1D15Q8TC07 691 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 MED30Q96HR3 178 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 C1orf147Q96MC9 270 aaPredicted RBP16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 CCL13Q99616 98 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 CENPOQ9BU64 300 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 FUNDC2Q9BWH2 189 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 CTSZQ9UBR2 303 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 POLR3KQ9Y2Y1 108 aaPredicted RBP16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 V9GY05 133 aa16.14■□□□□ 0.17
PCOLCE-208ENST00000487172 ZNF469Q96JG9 3925 aaPredicted RBP16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 LOC100506127A0A0U1RQW1 187 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 NKX6-3A6NJ46 265 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 B4DSR2 109 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 SLC17A2O00624 439 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 SLC22A1O15245 554 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 SIGLEC5O15389 551 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 FOXH1O75593 365 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 PRKACAP17612 351 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 RAB3BP20337 219 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 HTR2CP28335 458 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 RPL5P46777 297 aaKnown RBP16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 C11orf91Q3C1V1 193 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 ESCO2Q56NI9 601 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 AWAT2Q6E213 333 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 GLIPR1L1Q6UWM5 242 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 LINC01356Q8N9X3 169 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 OR6M1Q8NGM8 313 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 GAFA1Q96PS6 74 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 ELL3Q9HB65 397 aaPredicted RBP16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 SCOCQ9UIL1 159 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 MAB21L2Q9Y586 359 aa16.13■□□□□ 0.17
PCOLCE-208ENST00000487172 GPR37O15354 613 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 HTR3BO95264 441 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 CSTBP04080 98 aaKnown RBP16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 CHRM2P08172 466 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 UBBP0CG47 229 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 CFPP27918 469 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 GABRA2P47869 451 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 PITPNBP48739 271 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 SEC61A1P61619 476 aaKnown RBP16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 IL13RA1P78552 427 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 DGUOKQ16854 277 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 NHLRC3Q5JS37 347 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 WDR25Q64LD2 544 aaPredicted RBP16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 GPR141Q7Z602 305 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 BIVMQ86UB2 503 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 ANKRD13BQ86YJ7 626 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 ZNF561Q8N587 486 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 CD177Q8N6Q3 437 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 SLC25A28Q96A46 364 aa16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 MSI2Q96DH6 328 aaKnown RBP16.12■□□□□ 0.17
PCOLCE-208ENST00000487172 MRPS24Q96EL2 167 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms