RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ST3GAL6Q9Y274 331 aa12.26□□□□□ -0.45
LRIF1-202ENST00000485275 MRPS7Q9Y2R9 242 aaKnown RBP12.26□□□□□ -0.45
LRIF1-202ENST00000485275 DYSFO75923 2080 aa12.26□□□□□ -0.45
LRIF1-202ENST00000485275 TRAV18A0A075B6X5 111 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 MEIOCA2RUB1 952 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 VSTM5A8MXK1 200 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 TRAPPC2LH3BP13 241 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 GABRR1P24046 479 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 COL8A1P27658 744 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 DUSP1P28562 367 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 DTX2Q86UW9 622 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 GCSAMQ8N6F7 178 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 OR51T1Q8NGJ9 327 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 UBTD1Q9HAC8 227 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 POLDIP2Q9Y2S7 368 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 hCG_1807616A0A1W2PRN6 198 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 LANCL1O43813 399 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 NOS1APO75052 506 aaPredicted RBP12.25□□□□□ -0.45
LRIF1-202ENST00000485275 HPXP02790 462 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 TFF1P04155 84 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 PRKACAP17612 351 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 MNDAP41218 407 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 SRP9P49458 86 aaKnown RBP12.25□□□□□ -0.45
LRIF1-202ENST00000485275 SNRPD2P62316 118 aaKnown RBP12.25□□□□□ -0.45
LRIF1-202ENST00000485275 DGCR2P98153 550 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 GUCA2AQ02747 115 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 GPR176Q14439 515 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 RNASE12Q5GAN4 147 aaKnown RBP12.25□□□□□ -0.45
LRIF1-202ENST00000485275 FAM201AQ5SY85 155 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 OR10R2Q8NGX6 335 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 LRRC29Q8WV35 223 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 EMG1Q92979 244 aaKnown RBP12.25□□□□□ -0.45
LRIF1-202ENST00000485275 ARHGAP5-AS1Q96IT6 56 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 TRAF4Q9BUZ4 470 aaPredicted RBP12.25□□□□□ -0.45
LRIF1-202ENST00000485275 CBLN4Q9NTU7 201 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 NBPF19A0A087WUL8 3843 aa12.25□□□□□ -0.45
LRIF1-202ENST00000485275 TMEM235A6NFC5 223 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 MFNGO00587 321 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 CYB5AP00167 134 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 ACAA1P09110 424 aaPredicted RBP12.24□□□□□ -0.45
LRIF1-202ENST00000485275 CSF3P09919 207 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 GNB3P16520 340 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 CPT2P23786 658 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 NR4A2P43354 598 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 ZNF260Q3ZCT1 412 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 PYDC2Q56P42 97 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 NHLRC3Q5JS37 347 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 FAM209AQ5JX71 171 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 PYHIN1Q6K0P9 492 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 FAM58AQ8N1B3 248 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 C19orf18Q8NEA5 215 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 TRIM63Q969Q1 353 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 DIRC2Q96SL1 478 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 URM1Q9BTM9 101 aaKnown RBP12.24□□□□□ -0.45
LRIF1-202ENST00000485275 PLEKHF2Q9H8W4 249 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 SAP30LQ9HAJ7 183 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 GCN1Q92616 2671 aaKnown RBP12.24□□□□□ -0.45
LRIF1-202ENST00000485275 TACC2O95359 2948 aa12.24□□□□□ -0.45
LRIF1-202ENST00000485275 METTL21EPA6NDL7 271 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 SRRM5B3KS81 715 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 CYB5R3P00387 301 aaPredicted RBP12.23□□□□□ -0.45
LRIF1-202ENST00000485275 LHBP01229 141 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 PTBP1P26599 531 aaKnown RBP eCLIP12.23□□□□□ -0.455e-8■■■■□ 19.8
LRIF1-202ENST00000485275 CHATP28329 748 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 CEBPDP49716 269 aaPredicted RBP12.23□□□□□ -0.45
LRIF1-202ENST00000485275 PPOXP50336 477 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 MZT1Q08AG7 82 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 TESK1Q15569 626 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 SP5Q6BEB4 398 aaPredicted RBP12.23□□□□□ -0.45
LRIF1-202ENST00000485275 BRICD5Q6PL45 260 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 C6orf201Q7Z4U5 140 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 Q8N402 240 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 Q8TCH9 128 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 MRPS24Q96EL2 167 aaKnown RBP12.23□□□□□ -0.45
LRIF1-202ENST00000485275 MS4A5Q9H3V2 200 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 FN3KRPQ9HA64 309 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 DIABLOQ9NR28 239 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 LAMP3Q9UQV4 416 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 CELSR2Q9HCU4 2923 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 DOPEY2Q9Y3R5 2298 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 A0A0A6YYH2 397 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 A6NJ64 397 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 NXPH2O95156 264 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 HIST1H1DP16402 221 aaKnown RBP12.23□□□□□ -0.45
LRIF1-202ENST00000485275 TNFSF4P23510 183 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 BLVRBP30043 206 aaPredicted RBP12.23□□□□□ -0.45
LRIF1-202ENST00000485275 CFHR2P36980 270 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 ACP7Q6ZNF0 438 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 DNM1P46Q6ZS02 220 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 ZNF295-AS1Q8N0V1 137 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 OR56B1Q8NGI3 324 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 DYRK2Q92630 601 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 BORCS5Q969J3 196 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 YIPF5Q969M3 257 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 RAB3CQ96E17 227 aa12.23□□□□□ -0.45
LRIF1-202ENST00000485275 NUDT16L1Q9BRJ7 211 aaKnown RBP12.23□□□□□ -0.45
LRIF1-202ENST00000485275 CLEC4MQ9H2X3 399 aaPredicted RBP12.23□□□□□ -0.45
LRIF1-202ENST00000485275 DSCAMO60469 2012 aa12.22□□□□□ -0.45
LRIF1-202ENST00000485275 AKAP6Q13023 2319 aa12.22□□□□□ -0.45
LRIF1-202ENST00000485275 CTDSPLO15194 276 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms