RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 DUX4L9Q6RFH8 374 aaPredicted RBP11.08□□□□□ -0.64
HDAC1-208ENST00000482310 PRSS57Q6UWY2 283 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 LYPD2Q6UXB3 125 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 ACP7Q6ZNF0 438 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 NR2C2APQ86WQ0 139 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 FAM90A1Q86YD7 464 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 CLDND2Q8NHS1 167 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 FAM46BQ96A09 425 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 NRIP2Q9BQI9 281 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 TMEM246Q9BRR3 403 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 NLKQ9UBE8 527 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 DUX4Q9UBX2 424 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 V9GY05 133 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 FLNAP21333 2647 aaKnown RBP11.08□□□□□ -0.64
HDAC1-208ENST00000482310 MTORP42345 2549 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 DSCAML1Q8TD84 2053 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 TRAV38-1A0A0B4J264 116 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 VWC2LB2RUY7 222 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 H7C1Q1 480 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 NOL3O60936 208 aaKnown RBP11.07□□□□□ -0.64
HDAC1-208ENST00000482310 SLC2A2P11168 524 aaPredicted RBP11.07□□□□□ -0.64
HDAC1-208ENST00000482310 RPS2P15880 293 aaKnown RBP11.07□□□□□ -0.64
HDAC1-208ENST00000482310 HTR2CP28335 458 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 MTNR1BP49286 362 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 SCN1BQ07699 218 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 ZNF404Q494X3 552 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 OR10K2Q6IF99 312 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 ANKRD13BQ86YJ7 626 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 FAM58AQ8N1B3 248 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 CIARTQ8N365 385 aaPredicted RBP11.07□□□□□ -0.64
HDAC1-208ENST00000482310 NDNFQ8TB73 568 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 CCL13Q99616 98 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 REG4Q9BYZ8 158 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 METTL9Q9H1A3 318 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 BANF2Q9H503 90 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 TMEM165Q9HC07 324 aa11.07□□□□□ -0.64
HDAC1-208ENST00000482310 NKX6-3A6NJ46 265 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 RFPL4AA6NLU0 287 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 OR2AT4A6NND4 320 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 CEACAM18A8MTB9 384 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 RFPL4AL1F8VTS6 287 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 ADAM20O43506 726 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 CRTAPO75718 401 aaPredicted RBP11.06□□□□□ -0.64
HDAC1-208ENST00000482310 KDM4BO94953 1096 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 GABARAPO95166 117 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 CSTBP04080 98 aaKnown RBP11.06□□□□□ -0.64
HDAC1-208ENST00000482310 SELLP14151 372 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 USF1P22415 310 aaPredicted RBP11.06□□□□□ -0.64
HDAC1-208ENST00000482310 SEC61A1P61619 476 aaKnown RBP11.06□□□□□ -0.64
HDAC1-208ENST00000482310 IKZF1Q13422 519 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 PIGYQ3MUY2 71 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 GDPGP1Q6ZNW5 385 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 LRRC28Q86X40 367 aaPredicted RBP11.06□□□□□ -0.64
HDAC1-208ENST00000482310 MUC20Q8N307 709 aaPredicted RBP11.06□□□□□ -0.64
HDAC1-208ENST00000482310 FGFRL1Q8N441 504 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 FAM216BQ8N7L0 139 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 ZSCAN4Q8NAM6 433 aaPredicted RBP11.06□□□□□ -0.64
HDAC1-208ENST00000482310 OR6M1Q8NGM8 313 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 FOXRED1Q96CU9 486 aaPredicted RBP11.06□□□□□ -0.64
HDAC1-208ENST00000482310 UQCC2Q9BRT2 126 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 LPAR2Q9HBW0 351 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 DAPK2Q9UIK4 370 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 METRNQ9UJH8 293 aa11.06□□□□□ -0.64
HDAC1-208ENST00000482310 ZNF469Q96JG9 3925 aaPredicted RBP11.06□□□□□ -0.64
HDAC1-208ENST00000482310 KIAA2026Q5HYC2 2103 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 IGKV1D-17A0A075B6S4 117 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 A0A0G2JK05 382 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 SIRPB1O00241 398 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 SLC17A2O00624 439 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 HSPB6O14558 160 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 TMPRSS2O15393 492 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 NOS1APO75052 506 aaPredicted RBP11.05□□□□□ -0.64
HDAC1-208ENST00000482310 MPIG6BO95866 241 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 PSG2P11465 335 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 MUC1P15941 1255 aaPredicted RBP11.05□□□□□ -0.64
HDAC1-208ENST00000482310 CFHR2P36980 270 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 CAPZA1P52907 286 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 ERVK11-1P61568 191 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 CTF1Q16619 201 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 IDNKQ5T6J7 187 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 TEX36Q5VZQ5 186 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 STUMQ69YW2 141 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 FIP1L1Q6UN15 594 aaKnown RBP11.05□□□□□ -0.64
HDAC1-208ENST00000482310 LYPD6Q86Y78 171 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 Q8IYB0 196 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 SAXO1Q8IYX7 474 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 SPICQ8N5J4 248 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 CD177Q8N6Q3 437 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 PXT1Q8NFP0 134 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 OR51D1Q8NGF3 324 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 ZNF665Q9H7R5 613 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 HES4Q9HCC6 221 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 HMG20AQ9NP66 347 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 RASL12Q9NYN1 266 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 ZANQ9Y493 2812 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 WNK2Q9Y3S1 2297 aa11.05□□□□□ -0.64
HDAC1-208ENST00000482310 MALRD1Q5VYJ5 2156 aa11.04□□□□□ -0.64
HDAC1-208ENST00000482310 SLC22A1O15245 554 aa11.04□□□□□ -0.64
HDAC1-208ENST00000482310 HAND1O96004 215 aa11.04□□□□□ -0.64
HDAC1-208ENST00000482310 IGHV2-5P01817 119 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms