RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PCBP2Q15366 365 aaKnown RBP eCLIP4.89□□□□□ -1.63
USF3-202ENST00000478658 ARL17AQ8IVW1 177 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 KHSRPQ92945 711 aaKnown RBP eCLIP4.89□□□□□ -1.63
USF3-202ENST00000478658 SPSB1Q96BD6 273 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 OR5M11Q96RB7 305 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 CSF3RQ99062 836 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 PRSS16Q9NQE7 514 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 GKN1Q9NS71 199 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 CCL27Q9Y4X3 112 aa4.89□□□□□ -1.63
USF3-202ENST00000478658 A0A1B0GTI1 187 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 TMEM189-UBE2V1I3L0A0 370 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 WDR5P61964 334 aaKnown RBP4.88□□□□□ -1.63
USF3-202ENST00000478658 SPANXN5Q5MJ07 72 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 TGIF2LYQ8IUE0 185 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 OR2V1Q8NHB1 315 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 OR51E1Q8TCB6 317 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 CHST2Q9Y4C5 530 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 SVILO95425 2214 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 NUP153P49790 1475 aaKnown RBP4.88□□□□□ -1.63
USF3-202ENST00000478658 DCCP43146 1447 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 LEFTY2O00292 366 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 FCGR3AP08637 254 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 MORN4Q8NDC4 146 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 IL17REQ8NFR9 667 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 PHYHIPLQ96FC7 376 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 ABHD14AQ9BUJ0 271 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 SFXN3Q9BWM7 321 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 MMP26Q9NRE1 261 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 PPT2Q9UMR5 302 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 DOT1LQ8TEK3 1739 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 HMGN2P05204 90 aaKnown RBP4.88□□□□□ -1.63
USF3-202ENST00000478658 SRD5A2P31213 254 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 SELENOWP63302 87 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 VGLL4Q14135 290 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 LTC4SQ16873 150 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 TMEM176BQ3YBM2 270 aaPredicted RBP4.88□□□□□ -1.63
USF3-202ENST00000478658 WFDC8Q8IUA0 241 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 OR52N1Q8NH53 320 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 ABHD3Q8WU67 409 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 CYB5D2Q8WUJ1 264 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 PIK3IP1Q96FE7 263 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 HSD17B10Q99714 261 aaKnown RBP4.88□□□□□ -1.63
USF3-202ENST00000478658 SPATA25Q9BR10 227 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 NUP214P35658 2090 aaPredicted RBP4.88□□□□□ -1.63
USF3-202ENST00000478658 CABIN1Q9Y6J0 2220 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 A0A1B0GU03 582 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 A0A1W2PQU0 124 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 PRSS37A4D1T9 235 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 CTDSPLO15194 276 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 ZNF888P0CJ79 500 aaPredicted RBP4.88□□□□□ -1.63
USF3-202ENST00000478658 CPMP14384 443 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 SEMG2Q02383 582 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 MGAT3Q09327 533 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 SLC10A2Q12908 348 aaPredicted RBP4.88□□□□□ -1.63
USF3-202ENST00000478658 ZNF528Q3MIS6 628 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 DACT2Q5SW24 774 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 DNLZQ5SXM8 178 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 LINC00346Q8IVM7 164 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 IGSF21Q96ID5 467 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 ZNF696Q9H7X3 374 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 SLIT3O75094 1523 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 PCNX2A6NKB5 2137 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 TNFRSF10CO14798 259 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 ATP5LO75964 103 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 C1SP09871 688 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 CCL5P13501 91 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 HRH1P35367 487 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 CITED1Q99966 193 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 RHNO1Q9BSD3 238 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 BEX1Q9HBH7 125 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 NOX4Q9NPH5 578 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 IER3IP1Q9Y5U9 82 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 TRGV8A0A0C4DH27 118 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 CCSO14618 274 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 MOSPD3O75425 235 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 WNT5AP41221 380 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 CCL11P51671 97 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 ZNF648Q5T619 568 aaPredicted RBP4.88□□□□□ -1.63
USF3-202ENST00000478658 MORN3Q6PF18 240 aaPredicted RBP4.88□□□□□ -1.63
USF3-202ENST00000478658 ETV3LQ6ZN32 361 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 FDCSPQ8NFU4 85 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 UBE2WQ96B02 151 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 PARP12Q9H0J9 701 aaKnown RBP4.88□□□□□ -1.63
USF3-202ENST00000478658 A0A0G2JLM5 398 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 PSMB5P28074 263 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 ELAVL1Q15717 326 aaKnown RBP4.88□□□□□ -1.63
USF3-202ENST00000478658 SLC5A12Q1EHB4 618 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 NPNTQ6UXI9 565 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 ANKRD29Q8N6D5 301 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 HGDQ93099 445 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 MRGPRX4Q96LA9 322 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 OXGR1Q96P68 337 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 GLIPR2Q9H4G4 154 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 FBXO8Q9NRD0 319 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 DNAJC13O75165 2243 aa4.88□□□□□ -1.63
USF3-202ENST00000478658 SMIM28A0A1B0GU29 152 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 ZNF593O00488 134 aaPredicted RBP4.87□□□□□ -1.63
USF3-202ENST00000478658 GPR75O95800 540 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 GYPAP02724 150 aa4.87□□□□□ -1.63
USF3-202ENST00000478658 OR1E2P47887 323 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms