RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 C12orf4Q9NQ89 552 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 FAM206AQ9NX38 181 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 COMMD9Q9P000 198 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 CD84Q9UIB8 345 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 CLEC4EQ9ULY5 219 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 NEUROG3Q9Y4Z2 214 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 ARHGEF10O15013 1369 aa3.08□□□□□ -1.92
VPS13D-207ENST00000476169 EIF3AQ14152 1382 aaKnown RBP3.08□□□□□ -1.92
VPS13D-207ENST00000476169 A0A0J9YXV3 536 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 DAPL1A0PJW8 107 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 OR2AT4A6NND4 320 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 EFCAB9A8MZ26 197 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 F5H768 121 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 M0R036 132 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 RBBP9O75884 186 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 DHRS3O75911 302 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 OR5F1O95221 314 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 THY1P04216 161 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 PCCAP05165 728 aaPredicted RBP3.07□□□□□ -1.92
VPS13D-207ENST00000476169 ZNF35P13682 527 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 CD70P32970 193 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 ACOT2P49753 483 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 NKX2-5P52952 324 aaPredicted RBP3.07□□□□□ -1.92
VPS13D-207ENST00000476169 HERVK_113P61574 105 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 VBP1P61758 197 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 MLLT11Q13015 90 aaPredicted RBP3.07□□□□□ -1.92
VPS13D-207ENST00000476169 KIAA0040Q15053 153 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 PMVKQ15126 192 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 TOMM34Q15785 309 aaPredicted RBP3.07□□□□□ -1.92
VPS13D-207ENST00000476169 TCEAL5Q5H9L2 206 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 FBXW9Q5XUX1 488 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 STPG2Q8N412 459 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 CCNYL1Q8N7R7 359 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 ERMNQ8TAM6 284 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 RXFP4Q8TDU9 374 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 TCEAL3Q969E4 200 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 KCTD7Q96MP8 289 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 HBEGFQ99075 208 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 UGT2B28Q9BY64 529 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 PARP12Q9H0J9 701 aaKnown RBP3.07□□□□□ -1.92
VPS13D-207ENST00000476169 LHX5Q9H2C1 402 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 VCX3BQ9H321 246 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 SLC40A1Q9NP59 571 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 DIABLOQ9NR28 239 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 BABAM2Q9NXR7 383 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 ZNF226Q9NYT6 803 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 TAS2R9Q9NYW1 312 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 PAK5Q9P286 719 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 MTCH2Q9Y6C9 303 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 KTN1Q86UP2 1357 aaKnown RBP3.07□□□□□ -1.92
VPS13D-207ENST00000476169 ADGRB2O60241 1585 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 USP32Q8NFA0 1604 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 POLR1AO95602 1720 aaPredicted RBP3.07□□□□□ -1.92
VPS13D-207ENST00000476169 NALCNQ8IZF0 1738 aa3.07□□□□□ -1.92
VPS13D-207ENST00000476169 TRAV19A0A0A6YYK7 116 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 OVOS2A0A0J9YW53 1432 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 RBFOX3A6NFN3 312 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 ZNF233A6NK53 670 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 CENPBD1B2RD01 187 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 TMEM114B3SHH9 223 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 H0Y9J4 135 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 CCRL2O00421 344 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 GPR171O14626 319 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 CYTH3O43739 400 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 NDUFS5O43920 106 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 SUPT3HO75486 399 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 CPDO75976 1380 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 SEMA3DO95025 777 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 IGKV1D-16P01601 117 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 HLA-DPB1P04440 258 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 CALB1P05937 261 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 ZDHHC11BP0C7U3 371 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 TDGF1P13385 188 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 HTR1EP28566 365 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 APLNRP35414 380 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 TGM4P49221 684 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 MEOX2P50222 304 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 TDGF1P3P51864 188 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 SYNJ2BPP57105 145 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 ACTBP60709 375 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 ACTG1P63261 375 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 IFITM3Q01628 133 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 NAB1Q13506 487 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 IMPG1Q17R60 797 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 TBC1D28Q2M2D7 210 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 SLC25A35Q3KQZ1 300 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 ORMDL2Q53FV1 153 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 CLVS2Q5SYC1 327 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 OVOS2Q6IE36 1432 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 CASP12Q6UXS9 341 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 ACP7Q6ZNF0 438 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 STX12Q86Y82 276 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 WDFY1Q8IWB7 410 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 HS3ST5Q8IZT8 346 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 C14orf178Q8N769 122 aaPredicted RBP3.06□□□□□ -1.92
VPS13D-207ENST00000476169 C19orf18Q8NEA5 215 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 TMEM101Q96IK0 257 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 PPP1R36Q96LQ0 422 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 FAM19A4Q96LR4 140 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms