RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 RAB31Q13636 194 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 GGTLC2Q14390 218 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 PSG5Q15238 335 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 GUK1Q16774 197 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 KRTAP27-1Q3LI81 207 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 GCSAMLQ5JQS6 135 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 CTRB2Q6GPI1 263 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 CGB2Q6NT52 195 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 FAM183BPQ6ZVS7 135 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 TMEM150AQ86TG1 271 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 MRPL52Q86TS9 123 aaKnown RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 FAM71AQ8IYT1 594 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZFP82Q8N141 532 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 PNKDQ8N490 385 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZADH2Q8N4Q0 377 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 WDR31Q8NA23 367 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 VN1R2Q8NFZ6 395 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 ACTL9Q8TC94 416 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 SFXN5Q8TD22 340 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 RNASEH2CQ8TDP1 164 aaKnown RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 PYDC1Q8WXC3 89 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 DCUN1D4Q92564 292 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 CREB3L1Q96BA8 519 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 RPUSD4Q96CM3 377 aaKnown RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 RCN3Q96D15 328 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 DGCR14Q96DF8 476 aaKnown RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 SCGB3A2Q96PL1 93 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 STACQ99469 402 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 P2RX4Q99571 388 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 TSNAXQ99598 290 aaKnown RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 FOXC2Q99958 501 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 RSG1Q9BU20 258 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 PARD6GQ9BYG4 376 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 DEFB126Q9BYW3 111 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 TSGA10Q9BZW7 698 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 TOLLIPQ9H0E2 274 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 MFSD1Q9H3U5 465 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 HRASLSQ9HDD0 168 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 ISYNA1Q9NPH2 558 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 IFT46Q9NQC8 304 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 SHPKQ9UHJ6 478 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 SNX12Q9UMY4 172 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNF256Q9Y2P7 627 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 ARL2BPQ9Y2Y0 163 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 LAMA2P24043 3122 aaKnown RBP2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 GON4LQ3T8J9 2241 aa2.8□□□□□ -1.96
HMGB1P25-201ENST00000468402 C5orf42Q9H799 3197 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 REV3LO60673 3130 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 KIAA1549LQ6ZVL6 1849 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 A0A0G2JLM5 398 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 KIR2DS1A0A191URI9 304 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNF726A6NNF4 738 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 CYSRT1A8MQ03 144 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 SRRM5B3KS81 715 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 SMKR1H3BMG3 65 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 NUPL2O15504 423 aaKnown RBP2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 TGOLN2O43493 480 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 HCRTR1O43613 425 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 CDC40O60508 579 aaKnown RBP eCLIP2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 RDH16O75452 317 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 KLF8O95600 359 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 KRT75O95678 551 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 ACTL6AO96019 429 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 CD3GP09693 182 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR8U9P0C7N5 309 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 HIST1H1CP16403 213 aaKnown RBP2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 GGT1P19440 569 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 RAB5AP20339 215 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 GABRR1P24046 479 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 G0S2P27469 103 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 RPA3P35244 121 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 PRLHRP49683 370 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 MNAT1P51948 309 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 RWDD2BP57060 319 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 RAB8AP61006 207 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 CXCR4P61073 352 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 RPL31P62899 125 aaKnown RBP2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 S100A12P80511 92 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 SLC25A11Q02978 314 aaKnown RBP2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 PRKCDQ05655 676 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 MGAT3Q09327 533 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNF763Q0D2J5 394 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 SMARCB1Q12824 385 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 BNIP2Q12982 314 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 KIR2DS1Q14954 304 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 MAD2L1BPQ15013 274 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 KIAA0040Q15053 153 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 ACTL10Q5JWF8 245 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 KCTD16Q68DU8 428 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 HBMQ6B0K9 141 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 DNAJC24Q6P3W2 148 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 DCUN1D2Q6PH85 259 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 DRAM2Q6UX65 266 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 LINC00336Q6ZUF6 198 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 MRPL55Q7Z7F7 128 aaKnown RBP2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 HORMAD1Q86X24 394 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 C10orf107Q8IVU9 208 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 HS3ST5Q8IZT8 346 aa2.79□□□□□ -1.96
HMGB1P25-201ENST00000468402 TMEM61Q8N0U2 210 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms