RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 CACNG6Q9BXT2 260 aa5□□□□□ -1.61
USP39-213ENST00000467885 RAB1BQ9H0U4 201 aa5□□□□□ -1.61
USP39-213ENST00000467885 METTL9Q9H1A3 318 aa5□□□□□ -1.61
USP39-213ENST00000467885 KCNK15Q9H427 330 aa5□□□□□ -1.61
USP39-213ENST00000467885 BANF2Q9H503 90 aa5□□□□□ -1.61
USP39-213ENST00000467885 RHOFQ9HBH0 211 aa5□□□□□ -1.61
USP39-213ENST00000467885 TMEM165Q9HC07 324 aa5□□□□□ -1.61
USP39-213ENST00000467885 HMG20AQ9NP66 347 aa5□□□□□ -1.61
USP39-213ENST00000467885 DECR2Q9NUI1 292 aa5□□□□□ -1.61
USP39-213ENST00000467885 FAIMQ9NVQ4 179 aa5□□□□□ -1.61
USP39-213ENST00000467885 RASL12Q9NYN1 266 aa5□□□□□ -1.61
USP39-213ENST00000467885 TREM2Q9NZC2 230 aa5□□□□□ -1.61
USP39-213ENST00000467885 PTTG2Q9NZH5 202 aa5□□□□□ -1.61
USP39-213ENST00000467885 ZNF581Q9P0T4 197 aa5□□□□□ -1.61
USP39-213ENST00000467885 RNF7Q9UBF6 113 aa5□□□□□ -1.61
USP39-213ENST00000467885 PPP1R3CQ9UQK1 317 aa5□□□□□ -1.61
USP39-213ENST00000467885 KCNK7Q9Y2U2 307 aa5□□□□□ -1.61
USP39-213ENST00000467885 FBN2P35556 2912 aa5□□□□□ -1.61
USP39-213ENST00000467885 ABCA4P78363 2273 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 ICE1Q9Y2F5 2266 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 IGHV1-69-2A0A0G2JMI3 117 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 SRRM5B3KS81 715 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 TRAPPC2LH3BP13 241 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 SOCS1O15524 211 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 CDC14BO60729 498 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 ZNF780AO75290 641 aaPredicted RBP4.99□□□□□ -1.61
USP39-213ENST00000467885 LY6HO94772 140 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 FSTL3O95633 263 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 CYB5R3P00387 301 aaPredicted RBP4.99□□□□□ -1.61
USP39-213ENST00000467885 PLATP00750 562 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 APOA1P02647 267 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 EIF4EP06730 217 aaKnown RBP4.99□□□□□ -1.61
USP39-213ENST00000467885 MELTFP08582 738 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 INHBBP09529 407 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 GTF2F2P13984 249 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 EGR1P18146 543 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 TNFRSF1AP19438 455 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 DUSP1P28562 367 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 PRDX2P32119 198 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 CDKN1AP38936 164 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 ETV6P41212 452 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 PTH2RP49190 550 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 EFNA4P52798 201 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 TMEM33P57088 247 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 FGF12P61328 243 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 SNRPD2P62316 118 aaKnown RBP4.99□□□□□ -1.61
USP39-213ENST00000467885 RPS27AP62979 156 aaKnown RBP4.99□□□□□ -1.61
USP39-213ENST00000467885 ZNF146Q15072 292 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 PDCD1Q15116 288 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 RSU1Q15404 277 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 TAF9Q16594 264 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 MOGAT2Q3SYC2 334 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 NHLRC3Q5JS37 347 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 ATPAF1Q5TC12 328 aaPredicted RBP4.99□□□□□ -1.61
USP39-213ENST00000467885 AWAT2Q6E213 333 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 MZT2AQ6P582 158 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 ACP7Q6ZNF0 438 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 C20orf204Q6ZNR8 217 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 CCDC190Q86UF4 302 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 LRRC28Q86X40 367 aaPredicted RBP4.99□□□□□ -1.61
USP39-213ENST00000467885 FAM58AQ8N1B3 248 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 OSR2Q8N2R0 312 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 CD177Q8N6Q3 437 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 DTX3Q8N9I9 347 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 PNLDC1Q8NA58 520 aaKnown RBP4.99□□□□□ -1.61
USP39-213ENST00000467885 OR5T2Q8NGG2 359 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 LGALS14Q8TCE9 139 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 CCL17Q92583 94 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 RDH5Q92781 318 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 S100A16Q96FQ6 103 aaKnown RBP4.99□□□□□ -1.61
USP39-213ENST00000467885 CEP19Q96LK0 163 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 Q96M66 194 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 WDFY2Q96P53 400 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 ABHD1Q96SE0 405 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 EGLN1Q9GZT9 426 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 FN3KRPQ9HA64 309 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 DYNLRB1Q9NP97 96 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 PCDHB16Q9NRJ7 776 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 TMEM106BQ9NUM4 274 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 RBFOX1Q9NWB1 397 aaKnown RBP4.99□□□□□ -1.61
USP39-213ENST00000467885 IL36RNQ9UBH0 155 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 PEX16Q9Y5Y5 336 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 ETV7Q9Y603 341 aa4.99□□□□□ -1.61
USP39-213ENST00000467885 HRNRQ86YZ3 2850 aaPredicted RBP4.99□□□□□ -1.61
USP39-213ENST00000467885 LRRK2Q5S007 2527 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 ANKHD1Q8IWZ3 2542 aaKnown RBP4.98□□□□□ -1.61
USP39-213ENST00000467885 GCN1Q92616 2671 aaKnown RBP4.98□□□□□ -1.61
USP39-213ENST00000467885 IGKV1D-17A0A075B6S4 117 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 PPIAL4EA0A075B759 164 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 FABP12A6NFH5 140 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 A6NLC8 198 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 RFPL4AA6NLU0 287 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 PPIAL4DF5H284 164 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 RFPL4AL1F8VTS6 287 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 IFNL4K9M1U5 179 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 GEMIN2O14893 280 aaKnown RBP4.98□□□□□ -1.61
USP39-213ENST00000467885 XRCC3O43542 346 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 FCN3O75636 299 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 ZNF205O95201 554 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 MPIG6BO95866 241 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms