RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 SLC25A37Q9NYZ2 338 aa5.05□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 WDR83OSQ9Y284 106 aa5.05□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 PCNTO95613 3336 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 CENPVL3A0A0U1RRI6 287 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 TMEM218A2RU14 115 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 FXYD1O00168 92 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 MBTPS2O43462 519 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 IGF1P05019 195 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 CD2P06729 351 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 NGFRP08138 427 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 LIMS3P0CW19 117 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 LIMS4P0CW20 117 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 MAKP20794 623 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 LMO2P25791 158 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 GRPRP30550 384 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 RPL34P49207 117 aaKnown RBP5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 CLDN15P56746 228 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 HSF1Q00613 529 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 KLRB1Q12918 225 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ZNF585BQ52M93 769 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 TP53I3Q53FA7 332 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 CST9Q5W186 159 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ALKAL2Q6UX46 152 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 SLC35F2Q8IXU6 374 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 TMEM151AQ8N4L1 468 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 BMPERQ8N8U9 685 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 SLC16A11Q8NCK7 471 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 OR8U1Q8NH10 309 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 Q8WTZ3 238 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 SMARCD1Q96GM5 515 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 BTF3L4Q96K17 158 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ZNF354BQ96LW1 612 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 KRTAP9-9Q9BYP9 154 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 CHST5Q9GZS9 411 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 NOX4Q9NPH5 578 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 LHX9Q9NQ69 397 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 B3GAT1Q9P2W7 334 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 TMED3Q9Y3Q3 217 aa5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.04□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ZNF236Q9UL36 1845 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 NSG1A0A0A6YYJ2 146 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ZCWPW2A0A1B0GU75 182 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 TINCRA0A1B0GVN0 87 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 LRIT2A6NDA9 550 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 LMO7DNF2Z398 122 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 G3V3Q6 166 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 PHF1O43189 567 aaPredicted RBP5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ERI3O43414 337 aaKnown RBP5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ZIC3O60481 467 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 TRAPPC6AO75865 159 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 STK17BO94768 372 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 SIX6O95475 246 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 EML2O95834 649 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ARG1P05089 322 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ZNF14P17017 642 aaPredicted RBP5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 CXCL2P19875 107 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 CXCL3P19876 107 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ACRV1P26436 265 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 SDC2P34741 201 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 NSG1P42857 185 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 PAX9P55771 341 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 OR10A3P58181 314 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 LINC00310P59036 64 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 PPP3R1P63098 170 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 SLC25A52Q3SY17 297 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ACSF3Q4G176 576 aaPredicted RBP5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 BCL2L15Q5TBC7 163 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 OR4P4Q8NGL7 312 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 OR2T35Q8NGX2 323 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 OR4C6Q8NH72 309 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 OR4S2Q8NH73 311 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 SYNPRQ8TBG9 265 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 NPRL2Q8WTW4 380 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 RND1Q92730 232 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 POP5Q969H6 163 aaKnown RBP5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 LRRC58Q96CX6 371 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 SMCO4Q9NRQ5 59 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 OR1A1Q9P1Q5 309 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 VPS29Q9UBQ0 182 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 FBXL4Q9UKA2 621 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 LOXL2Q9Y4K0 774 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 MTCL1Q9Y4B5 1905 aaKnown RBP5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 A0A0A6YYD5 115 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 TRAPPC13A5PLN9 417 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 CASTOR2A6NHX0 329 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 YJEFN3A6XGL0 299 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ZNF670-ZNF695F2Z2N8 137 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 GNGT2O14610 69 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 WNT9BO14905 357 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 HCRTO43612 131 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 EIF4E2O60573 245 aaKnown RBP5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ATP5LO75964 103 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 FOLR1P15328 257 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 ABOP16442 354 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 HOXA5P20719 270 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 GPX3P22352 226 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 NFYAP23511 347 aaPredicted RBP5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 OR3A4PP47883 348 aa5.03□□□□□ -1.6
ALMS1-IT1-201ENST00000441587 STC1P52823 247 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms