RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 SYT7O43581 403 aa13.82□□□□□ -0.2
CPSF4-203ENST00000430038 IGHA1P01876 353 aa13.82□□□□□ -0.2
CPSF4-203ENST00000430038 GABRA5P31644 462 aa13.82□□□□□ -0.2
CPSF4-203ENST00000430038 KIR2DS4P43632 304 aa13.82□□□□□ -0.2
CPSF4-203ENST00000430038 NANOS3P60323 173 aaKnown RBP13.82□□□□□ -0.2
CPSF4-203ENST00000430038 ACTR3P61158 418 aa13.82□□□□□ -0.2
CPSF4-203ENST00000430038 HABP2Q14520 560 aaPredicted RBP13.82□□□□□ -0.2
CPSF4-203ENST00000430038 PLA1AQ53H76 456 aa13.82□□□□□ -0.2
CPSF4-203ENST00000430038 C1orf146Q5VVC0 180 aa13.82□□□□□ -0.2
CPSF4-203ENST00000430038 TPRX1Q8N7U7 411 aa13.82□□□□□ -0.2
CPSF4-203ENST00000430038 HEXA-AS1Q9H8Q6 139 aa13.82□□□□□ -0.2
CPSF4-203ENST00000430038 USE1Q9NZ43 259 aa13.82□□□□□ -0.2
CPSF4-203ENST00000430038 ODF3BA8MYP8 253 aa13.81□□□□□ -0.2
CPSF4-203ENST00000430038 J3QRE1 110 aa13.81□□□□□ -0.2
CPSF4-203ENST00000430038 SULT1C4O75897 302 aa13.81□□□□□ -0.2
CPSF4-203ENST00000430038 DUSP1P28562 367 aa13.81□□□□□ -0.2
CPSF4-203ENST00000430038 Q6ZS46 218 aa13.81□□□□□ -0.2
CPSF4-203ENST00000430038 SLC25A26Q70HW3 274 aa13.81□□□□□ -0.2
CPSF4-203ENST00000430038 ASCC1Q8N9N2 400 aaKnown RBP13.81□□□□□ -0.2
CPSF4-203ENST00000430038 OR10AC1Q8NH08 325 aa13.81□□□□□ -0.2
CPSF4-203ENST00000430038 CFHR4Q92496 578 aa13.81□□□□□ -0.2
CPSF4-203ENST00000430038 CENPNQ96H22 339 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-203ENST00000430038 CEP19Q96LK0 163 aa13.81□□□□□ -0.2
CPSF4-203ENST00000430038 CHST5Q9GZS9 411 aa13.81□□□□□ -0.2
CPSF4-203ENST00000430038 FAM234AQ9H0X4 552 aa13.81□□□□□ -0.2
CPSF4-203ENST00000430038 DNAH3Q8TD57 4116 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 LOC107986453A0A1B0GWG9 222 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 PSPNO60542 156 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 ENTPD6O75354 484 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 MMP23AO75900 390 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 FUT6P51993 359 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 AANATQ16613 207 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 BAIAP2L2Q6UXY1 529 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 EGFL6Q8IUX8 553 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 OR8J1Q8NGP2 316 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 PYDC1Q8WXC3 89 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 ZNF702PQ9H963 129 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 RBFOX1Q9NWB1 397 aaKnown RBP13.8□□□□□ -0.2
CPSF4-203ENST00000430038 FRRS1LQ9P0K9 344 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 GNG8Q9UK08 70 aa13.8□□□□□ -0.2
CPSF4-203ENST00000430038 IGKV1-12A0A0C4DH73 117 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 IGKV1D-12P01611 117 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 CHRM2P08172 466 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 ZNF728P0DKX0 622 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 IGHV1-8P0DP01 117 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 BCL3P20749 454 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 EDDM3BP56851 147 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 OR12D2P58182 307 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 HERPUD1Q15011 391 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 TMEM219Q86XT9 240 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 OR8H2Q8N162 312 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 LYG1Q8N1E2 194 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 KLHDC1Q8N7A1 406 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 OR4S1Q8NGB4 309 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 OR51A4Q8NGJ6 313 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 OR2G2Q8NGZ5 317 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 CHST6Q9GZX3 395 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 SERTAD4Q9NUC0 356 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 SLC7A11Q9UPY5 501 aa13.79□□□□□ -0.2
CPSF4-203ENST00000430038 VGLL3A8MV65 326 aa13.78□□□□□ -0.2
CPSF4-203ENST00000430038 H3BNX3 289 aa13.78□□□□□ -0.2
CPSF4-203ENST00000430038 ARG1P05089 322 aa13.78□□□□□ -0.2
CPSF4-203ENST00000430038 ALPLP05186 524 aa13.78□□□□□ -0.2
CPSF4-203ENST00000430038 SSX2Q16385 188 aa13.78□□□□□ -0.2
CPSF4-203ENST00000430038 ZIK1Q3SY52 487 aaPredicted RBP13.78□□□□□ -0.2
CPSF4-203ENST00000430038 FBLN7Q53RD9 439 aa13.78□□□□□ -0.2
CPSF4-203ENST00000430038 UTF1Q5T230 341 aa13.78□□□□□ -0.2
CPSF4-203ENST00000430038 ZNF626Q68DY1 528 aa13.78□□□□□ -0.2
CPSF4-203ENST00000430038 OR11H6Q8NGC7 330 aa13.78□□□□□ -0.2
CPSF4-203ENST00000430038 FGGYQ96C11 551 aa13.78□□□□□ -0.2
CPSF4-203ENST00000430038 SNX22Q96L94 193 aa13.78□□□□□ -0.2
CPSF4-203ENST00000430038 PLEKHA1Q9HB21 404 aa13.78□□□□□ -0.2
CPSF4-203ENST00000430038 A6NDX4 124 aa13.77□□□□□ -0.21
CPSF4-203ENST00000430038 G3V4G9 280 aa13.77□□□□□ -0.21
CPSF4-203ENST00000430038 HAND1O96004 215 aa13.77□□□□□ -0.21
CPSF4-203ENST00000430038 CSF1P09603 554 aa13.77□□□□□ -0.21
CPSF4-203ENST00000430038 SNU13P55769 128 aaKnown RBP13.77□□□□□ -0.21
CPSF4-203ENST00000430038 ZNF91Q05481 1191 aa13.77□□□□□ -0.21
CPSF4-203ENST00000430038 EDDM3AQ14507 147 aa13.77□□□□□ -0.21
CPSF4-203ENST00000430038 WIPF2Q8TF74 440 aaPredicted RBP13.77□□□□□ -0.21
CPSF4-203ENST00000430038 EMG1Q92979 244 aaKnown RBP13.77□□□□□ -0.21
CPSF4-203ENST00000430038 RFT1Q96AA3 541 aa13.77□□□□□ -0.21
CPSF4-203ENST00000430038 BORCS8Q96FH0 119 aa13.77□□□□□ -0.21
CPSF4-203ENST00000430038 HRASLS5Q96KN8 279 aa13.77□□□□□ -0.21
CPSF4-203ENST00000430038 SPACA5Q96QH8 159 aa13.77□□□□□ -0.21
CPSF4-203ENST00000430038 NKX3-1Q99801 234 aaPredicted RBP13.77□□□□□ -0.21
CPSF4-203ENST00000430038 TCF19Q9Y242 345 aa13.77□□□□□ -0.21
CPSF4-203ENST00000430038 A0A1W2PPH5 198 aa13.76□□□□□ -0.21
CPSF4-203ENST00000430038 VSIG10L2P0DP72 767 aa13.76□□□□□ -0.21
CPSF4-203ENST00000430038 FCGR1AP12314 374 aa13.76□□□□□ -0.21
CPSF4-203ENST00000430038 ATF1P18846 271 aa13.76□□□□□ -0.21
CPSF4-203ENST00000430038 ATP6V1E1P36543 226 aa13.76□□□□□ -0.21
CPSF4-203ENST00000430038 OR3A1P47881 315 aa13.76□□□□□ -0.21
CPSF4-203ENST00000430038 LGALS4P56470 323 aa13.76□□□□□ -0.21
CPSF4-203ENST00000430038 TMED1Q13445 227 aa13.76□□□□□ -0.21
CPSF4-203ENST00000430038 FAM189A2Q15884 450 aa13.76□□□□□ -0.21
CPSF4-203ENST00000430038 C2orf68Q2NKX9 166 aa13.76□□□□□ -0.21
CPSF4-203ENST00000430038 FDX2Q6P4F2 183 aa13.76□□□□□ -0.21
CPSF4-203ENST00000430038 GDPD3Q7L5L3 318 aa13.76□□□□□ -0.21
CPSF4-203ENST00000430038 Q8N2B8 174 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms