RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 HTR1AP08908 422 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 UBCP0CG48 685 aaKnown RBP7.57□□□□□ -1.2
NUP50-206ENST00000422489 ATF1P18846 271 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 GABRR1P24046 479 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 DUSP1P28562 367 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 POU3F4P49335 361 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 BMXP51813 675 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 MTCP1P56278 107 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 OR12D2P58182 307 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 ERVK11-1P61568 191 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 ACTC1P68032 377 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 ACTA1P68133 377 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 DYNC1I2Q13409 638 aaKnown RBP7.57□□□□□ -1.2
NUP50-206ENST00000422489 EDDM3AQ14507 147 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 ZNF273Q14593 569 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 OCLNQ16625 522 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 MIDNQ504T8 468 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 PLA1AQ53H76 456 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 MEDAGQ5VYS4 303 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 ZFP1Q6P2D0 407 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 Q6ZSR3 168 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 KCTD20Q7Z5Y7 419 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 LHFPL3Q86UP9 236 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 C10orf67Q8IYJ2 551 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 BEND2Q8NDZ0 799 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 OR2G2Q8NGZ5 317 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 OR5R1Q8NH85 324 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 EMG1Q92979 244 aaKnown RBP7.57□□□□□ -1.2
NUP50-206ENST00000422489 ADAT3Q96EY9 351 aaPredicted RBP7.57□□□□□ -1.2
NUP50-206ENST00000422489 CITED1Q99966 193 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 HES4Q9HCC6 221 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 USE1Q9NZ43 259 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 FRRS1LQ9P0K9 344 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 GMPPBQ9Y5P6 360 aa7.57□□□□□ -1.2
NUP50-206ENST00000422489 H3BNX3 289 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 TIMM23O14925 209 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 SLC16A6O15403 523 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 CLPXO76031 633 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 PRKACBP22694 351 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 AZGP1P25311 298 aaKnown RBP7.56□□□□□ -1.2
NUP50-206ENST00000422489 NPBWR2P48146 333 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 RBP2P50120 134 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 RAB13P51153 203 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 ALDH3A2P51648 485 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 PROK1P58294 105 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 SNRPGP62308 76 aaKnown RBP7.56□□□□□ -1.2
NUP50-206ENST00000422489 SCN1BQ07699 218 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 FAM189A2Q15884 450 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 C11orf42Q8N5U0 333 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 ZNF676Q8N7Q3 588 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 OR13C3Q8NGS6 347 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 PP6455Q8WZ26 134 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 RFT1Q96AA3 541 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 HRASLS5Q96KN8 279 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 C4orf36Q96KX1 117 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 SNX22Q96L94 193 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 NKX3-1Q99801 234 aaPredicted RBP7.56□□□□□ -1.2
NUP50-206ENST00000422489 MEGF9Q9H1U4 602 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 C16orf95Q9H693 158 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 NEK6Q9HC98 313 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 AMBNQ9NP70 447 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 GLS2Q9UI32 602 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 SIGLEC9Q9Y336 463 aa7.56□□□□□ -1.2
NUP50-206ENST00000422489 IGKV1-9A0A0C4DH69 117 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 TMEM82A0PJX8 343 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 C17orf98A8MV24 154 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 J3QRE1 110 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 KCNAB3O43448 404 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 TSPAN9O75954 239 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 BAG2O95816 211 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 HAND1O96004 215 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 ARG1P05089 322 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 ZNF728P0DKX0 622 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 PRKACAP17612 351 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 BCL3P20749 454 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 PEX2P28328 305 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 GABRA5P31644 462 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 NANOS3P60323 173 aaKnown RBP7.55□□□□□ -1.2
NUP50-206ENST00000422489 ISL1P61371 349 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 DEFA6Q01524 100 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 GRK1Q15835 563 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 LRRC75BQ2VPJ9 315 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 SLC25A30Q5SVS4 291 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 ASPHD2Q6ICH7 369 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 ZBTB49Q6ZSB9 765 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 LHFPL4Q7Z7J7 247 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 ENTHD1Q8IYW4 607 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 FAM58AQ8N1B3 248 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 ACBD7Q8N6N7 88 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 TPRX1Q8N7U7 411 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 DNAAF1Q8NEP3 725 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 OR13C9Q8NGT0 318 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 OR13D1Q8NGV5 346 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 OR10AC1Q8NH08 325 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 C10orf35Q96D05 121 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 LGALS12Q96DT0 336 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 MRPL48Q96GC5 212 aaKnown RBP7.55□□□□□ -1.2
NUP50-206ENST00000422489 AJUBAQ96IF1 538 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 Q96MT0 163 aa7.55□□□□□ -1.2
NUP50-206ENST00000422489 SPACA5Q96QH8 159 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms