RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 STAC2Q6ZMT1 411 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 C1orf122Q6ZSJ8 110 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 PGAP1Q75T13 922 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 LINGO2Q7L985 606 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 NUFIP2Q7Z417 695 aaKnown RBP3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 DPPA2Q7Z7J5 298 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 LRRC28Q86X40 367 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 FOXRED2Q8IWF2 684 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 SKA3Q8IX90 412 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ELMOD2Q8IZ81 293 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 RDH10Q8IZV5 341 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 GCNT2Q8N0V5 402 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 JAGN1Q8N5M9 183 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 MINDY2Q8NBR6 621 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 C19orf18Q8NEA5 215 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 CCDC54Q8NEL0 328 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR51A4Q8NGJ6 313 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR10S1Q8NGN2 331 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR1K1Q8NGR3 316 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR6K3Q8NGY3 331 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR10AC1Q8NH08 325 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR1F12Q8NHA8 337 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR51E1Q8TCB6 317 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ORAI1Q96D31 301 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 CPNE2Q96FN4 548 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 DUX3Q96PT4 197 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR2H1Q9GZK4 316 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 NEK6Q9HC98 313 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 GPR84Q9NQS5 396 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ATPIF1Q9UII2 106 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 TCF19Q9Y242 345 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 TIMM10BQ9Y5J6 103 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 ETV7Q9Y603 341 aa3.24□□□□□ -1.89
HMGB3P20-201ENST00000417997 BDP1A6H8Y1 2624 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 DNAH14Q0VDD8 3507 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 GPR179Q6PRD1 2367 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 TRAV8-7A0A075B6U6 113 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 A0A087WV48 116 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 A0A0B4J203 849 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 A0A0U1RQV5 110 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 A0A1W2PS18 150 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 ISPDA4D126 451 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 IFITM5A6NNB3 132 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 RPL36A-HNRNPH2H7BZ11 118 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 K7EM74 188 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC17A2O00624 439 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 PIN1P1O15428 100 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNHIT1O43257 154 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 SYNGR3O43761 229 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 RAD51DO75771 328 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 DHRS3O75911 302 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 PAHP00439 452 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 EIF4EP06730 217 aaKnown RBP3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 PATE4P0C8F1 98 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 ATF1P18846 271 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 CCNOP22674 350 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 CRYGSP22914 178 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 PTBP1P26599 531 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 BDKRB2P30411 391 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 CAPZA1P52907 286 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 CLDN12P56749 244 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 LINC01547P58512 204 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 HIST1H3AP68431 136 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 PITPNAQ00169 270 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 PSG4Q00888 419 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 SPOCK1Q08629 439 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 P2RY14Q15391 338 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF79Q15937 498 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 GSG1Q2KHT4 349 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 TBC1D28Q2M2D7 210 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 C2orf68Q2NKX9 166 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 KRTCAP3Q53RY4 240 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 PABPC1L2AQ5JQF8 200 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 TMEM69Q5SWH9 247 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 HIST2H3PS2Q5TEC6 136 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 NSUN5P2Q63ZY6 315 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF57Q68EA5 555 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 PYHIN1Q6K0P9 492 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 XKRXQ6PP77 449 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 METAP1DQ6UB28 335 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 TFAP2EQ6VUC0 442 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 HIST2H3AQ71DI3 136 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 MRPL21Q7Z2W9 205 aaKnown RBP3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 LRRTM1Q86UE6 522 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 CCDC190Q86UF4 302 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 TMEM219Q86XT9 240 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 SIAH3Q8IW03 269 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 SERPINA12Q8IW75 414 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 GDPD1Q8N9F7 314 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 POC5Q8NA72 575 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 NAXEQ8NCW5 288 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC24A4Q8NFF2 622 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR2AK2Q8NG84 335 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR1M1Q8NGA1 313 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR4M1Q8NGD0 313 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR52H1Q8NGJ2 320 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR5D14Q8NGL3 314 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR6M1Q8NGM8 313 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR1J2Q8NGS2 313 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR13C9Q8NGT0 318 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms