RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SLC34A1Q06495 639 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 RIPK1Q13546 671 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 XAF1Q6GPH4 301 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 TMPRSS11AQ6ZMR5 421 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 LHFPL2Q6ZUX7 228 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 RNF144BQ7Z419 303 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 FAM185AQ8N0U4 392 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 HAVCR2Q8TDQ0 301 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 TSEN15Q8WW01 171 aaKnown RBP15.49■□□□□ 0.07
TRIM56-202ENST00000412507 GGHQ92820 318 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 TMEM80Q96HE8 168 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 SPACA5Q96QH8 159 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 VCXQ9H320 206 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 ZCCHC4Q9H5U6 513 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 CLEC2DQ9UHP7 191 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 EXOSC1Q9Y3B2 195 aaKnown RBP15.49■□□□□ 0.07
TRIM56-202ENST00000412507 ANK2Q01484 3957 aa15.49■□□□□ 0.07
TRIM56-202ENST00000412507 SPRY1O43609 319 aaPredicted RBP15.48■□□□□ 0.07
TRIM56-202ENST00000412507 MYL12AP19105 171 aa15.48■□□□□ 0.07
TRIM56-202ENST00000412507 NPBWR2P48146 333 aa15.48■□□□□ 0.07
TRIM56-202ENST00000412507 LAIR2Q6ISS4 152 aa15.48■□□□□ 0.07
TRIM56-202ENST00000412507 RPL22L1Q6P5R6 122 aaKnown RBP15.48■□□□□ 0.07
TRIM56-202ENST00000412507 MKXQ8IYA7 352 aa15.48■□□□□ 0.07
TRIM56-202ENST00000412507 EMG1Q92979 244 aaKnown RBP15.48■□□□□ 0.07
TRIM56-202ENST00000412507 ZDHHC16Q969W1 377 aa15.48■□□□□ 0.07
TRIM56-202ENST00000412507 SPSB1Q96BD6 273 aa15.48■□□□□ 0.07
TRIM56-202ENST00000412507 C19orf12Q9NSK7 152 aa15.48■□□□□ 0.07
TRIM56-202ENST00000412507 DHDHQ9UQ10 334 aa15.48■□□□□ 0.07
TRIM56-202ENST00000412507 TRBV23-1A0A0A0MS06 115 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 XPNPEP2O43895 674 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 CYB5AP00167 134 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 MT-ND2P03891 347 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 RPSAP08865 295 aaKnown RBP15.47■□□□□ 0.07
TRIM56-202ENST00000412507 BCL3P20749 454 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 COL10A1Q03692 680 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 ST3GAL4Q11206 333 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 KLRD1Q13241 179 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 CDK5R1Q15078 307 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 SLC9A3R2Q15599 337 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 CCDC58Q4VC31 144 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 RGP1Q92546 391 aaPredicted RBP15.47■□□□□ 0.07
TRIM56-202ENST00000412507 PRDM13Q9H4Q3 707 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 RBFOX1Q9NWB1 397 aaKnown RBP15.47■□□□□ 0.07
TRIM56-202ENST00000412507 IL36RNQ9UBH0 155 aa15.47■□□□□ 0.07
TRIM56-202ENST00000412507 SIRT4Q9Y6E7 314 aaPredicted RBP15.47■□□□□ 0.07
TRIM56-202ENST00000412507 TMEM89A2RUT3 159 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 RNASEK-C17orf49H0YIS7 233 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 M0R1W7 72 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 ANGPTL7O43827 346 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 LALBAP00709 142 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 TK1P04183 234 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 CALCBP10092 127 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 SOX2P48431 317 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 PDZK1IP1Q13113 114 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 METAP1DQ6UB28 335 aaPredicted RBP15.46■□□□□ 0.07
TRIM56-202ENST00000412507 C1orf122Q6ZSJ8 110 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 SERPINA12Q8IW75 414 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 Q8IYB0 196 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 PARP16Q8N5Y8 322 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 ASCC1Q8N9N2 400 aaKnown RBP15.46■□□□□ 0.07
TRIM56-202ENST00000412507 OR4M1Q8NGD0 313 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 OR5D18Q8NGL1 313 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 OR5D14Q8NGL3 314 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 RPS4Y2Q8TD47 263 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 FBLIM1Q8WUP2 373 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 NRG4Q8WWG1 115 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 TFAP2CQ92754 450 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 GCDHQ92947 438 aaPredicted RBP15.46■□□□□ 0.07
TRIM56-202ENST00000412507 ZMAT3Q9HA38 289 aaKnown RBP15.46■□□□□ 0.07
TRIM56-202ENST00000412507 CHCHD3Q9NX63 227 aaKnown RBP15.46■□□□□ 0.07
TRIM56-202ENST00000412507 BABAM2Q9NXR7 383 aa15.46■□□□□ 0.07
TRIM56-202ENST00000412507 A0A1W2PRD5 423 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 A0A1W2PRF3 423 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 A0A1W2PRM7 423 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 EFCAB10A6NFE3 127 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 K7N7A8 449 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 HOXA3O43365 443 aaPredicted RBP15.45■□□□□ 0.06
TRIM56-202ENST00000412507 SULT1B1O43704 296 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 CHRM2P08172 466 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 HCKP08631 526 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 PIPP12273 146 aaPredicted RBP15.45■□□□□ 0.06
TRIM56-202ENST00000412507 PRKACAP17612 351 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 SNU13P55769 128 aaKnown RBP15.45■□□□□ 0.06
TRIM56-202ENST00000412507 RPL31P62899 125 aaKnown RBP15.45■□□□□ 0.06
TRIM56-202ENST00000412507 MED21Q13503 144 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 CRIP3Q6Q6R5 217 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 C12orf54Q6X4T0 127 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 Q6YL49 198 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 FAM58AQ8N1B3 248 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 PIP4P2Q8N4L2 257 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 BPIFB6Q8NFQ5 453 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 TNFRSF14Q92956 283 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 SLC25A28Q96A46 364 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 FAM234AQ9H0X4 552 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 NEK6Q9HC98 313 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 NOX4Q9NPH5 578 aa15.45■□□□□ 0.06
TRIM56-202ENST00000412507 IGKV1-12A0A0C4DH73 117 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 A0A0U1RQK1 487 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 CLDN34H7C241 214 aa15.44■□□□□ 0.06
TRIM56-202ENST00000412507 OGG1O15527 345 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms