RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 DBX2Q6ZNG2 339 aa20.64■□□□□ 0.9
PABPN1-202ENST00000397276 ZFP57Q9NU63 452 aa20.64■□□□□ 0.9
PABPN1-202ENST00000397276 TPT1P13693 172 aaKnown RBP20.64■□□□□ 0.89
PABPN1-202ENST00000397276 CCNOP22674 350 aa20.64■□□□□ 0.89
PABPN1-202ENST00000397276 AKR1C3P42330 323 aa20.64■□□□□ 0.89
PABPN1-202ENST00000397276 SUPT4H1P63272 117 aaKnown RBP20.64■□□□□ 0.89
PABPN1-202ENST00000397276 ZNF92Q03936 586 aa20.64■□□□□ 0.89
PABPN1-202ENST00000397276 TSPO2Q5TGU0 170 aa20.64■□□□□ 0.89
PABPN1-202ENST00000397276 NANPQ8TBE9 248 aa20.64■□□□□ 0.89
PABPN1-202ENST00000397276 DYRK2Q92630 601 aa20.64■□□□□ 0.89
PABPN1-202ENST00000397276 TM2D1Q9BX74 207 aa20.64■□□□□ 0.89
PABPN1-202ENST00000397276 OR2H1Q9GZK4 316 aa20.64■□□□□ 0.89
PABPN1-202ENST00000397276 TMEM100Q9NV29 134 aa20.64■□□□□ 0.89
PABPN1-202ENST00000397276 FRYQ5TBA9 3013 aa20.64■□□□□ 0.89
PABPN1-202ENST00000397276 DBX1A6NMT0 343 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 DHRS7CA6NNS2 312 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 F8VVB4 439 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 F8VWA3 439 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 ANKRD55Q3KP44 614 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 BORCS8Q96FH0 119 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 ASPMQ8IZT6 3477 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 A0A096LPE4 126 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 A0A1W2PPZ6 126 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 AGPAT2O15120 278 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 NEURL1O76050 574 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 ACAA1P09110 424 aaPredicted RBP20.63■□□□□ 0.89
PABPN1-202ENST00000397276 MUC1P15941 1255 aaPredicted RBP20.63■□□□□ 0.89
PABPN1-202ENST00000397276 ITGA3P26006 1051 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 SNRPEP62304 92 aaKnown RBP20.63■□□□□ 0.89
PABPN1-202ENST00000397276 AVPI1Q5T686 147 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 RBMS3Q6XE24 437 aaKnown RBP20.63■□□□□ 0.89
PABPN1-202ENST00000397276 SLC16A13Q7RTY0 426 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 RNF141Q8WVD5 230 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 METTL9Q9H1A3 318 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 OR6C6A6NF89 314 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 SERPINE3A8MV23 424 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 LINC00587B1AMM8 73 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 SFT2D2O95562 160 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 FPR2P25090 351 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 OPRM1P35372 400 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 ABHD17BQ5VST6 288 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 SLC30A7Q8NEW0 376 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 PIGCQ92535 297 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 CPNE4Q96A23 557 aaPredicted RBP20.63■□□□□ 0.89
PABPN1-202ENST00000397276 C10orf35Q96D05 121 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 Q96M66 194 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 OSGIN2Q9Y236 505 aa20.63■□□□□ 0.89
PABPN1-202ENST00000397276 NOSIPQ9Y314 301 aaKnown RBP20.63■□□□□ 0.89
PABPN1-202ENST00000397276 TEX13DA0A0J9YY54 714 aaPredicted RBP20.62■□□□□ 0.89
PABPN1-202ENST00000397276 PQLC2LA1A4F0 135 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 FAM221AA4D161 298 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 SNAPINO95295 136 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 NRASP01111 189 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 TAS2R46P59540 309 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 SWI5Q1ZZU3 235 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 Q6ZSR3 168 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 LHFPL1Q86WI0 220 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 SULF2Q8IWU5 870 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 ZPBPQ9BS86 351 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 METTL8Q9H825 291 aaKnown RBP20.62■□□□□ 0.89
PABPN1-202ENST00000397276 OR5AC2Q9NZP5 309 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 BOKQ9UMX3 212 aaPredicted RBP20.62■□□□□ 0.89
PABPN1-202ENST00000397276 CCL2P13500 99 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 RBP2P50120 134 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 OR2M7Q8NG81 312 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 STOML3Q8TAV4 291 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 EDARQ9UNE0 448 aa20.62■□□□□ 0.89
PABPN1-202ENST00000397276 CYTIPO60759 359 aa20.61■□□□□ 0.89
PABPN1-202ENST00000397276 MRPL33O75394 65 aaKnown RBP20.61■□□□□ 0.89
PABPN1-202ENST00000397276 PIGYQ3MUY2 71 aa20.61■□□□□ 0.89
PABPN1-202ENST00000397276 SPRY4Q9C004 299 aa20.61■□□□□ 0.89
PABPN1-202ENST00000397276 CALHM2Q9HA72 323 aa20.61■□□□□ 0.89
PABPN1-202ENST00000397276 ZNF587BE7ETH6 402 aa20.61■□□□□ 0.89
PABPN1-202ENST00000397276 HOXB5P09067 269 aa20.61■□□□□ 0.89
PABPN1-202ENST00000397276 SP9P0CG40 484 aa20.61■□□□□ 0.89
PABPN1-202ENST00000397276 MAGEA5P43359 124 aa20.61■□□□□ 0.89
PABPN1-202ENST00000397276 ID4P47928 161 aa20.61■□□□□ 0.89
PABPN1-202ENST00000397276 RPUSD3Q6P087 351 aaKnown RBP20.61■□□□□ 0.89
PABPN1-202ENST00000397276 SPSB1Q96BD6 273 aa20.61■□□□□ 0.89
PABPN1-202ENST00000397276 ZNF2Q9BSG1 426 aaPredicted RBP20.61■□□□□ 0.89
PABPN1-202ENST00000397276 FIGNL2A6NMB9 653 aa20.6■□□□□ 0.89
PABPN1-202ENST00000397276 C9JQL5 133 aa20.6■□□□□ 0.89
PABPN1-202ENST00000397276 FAM3AP98173 230 aa20.6■□□□□ 0.89
PABPN1-202ENST00000397276 CNN3Q15417 329 aaKnown RBP20.6■□□□□ 0.89
PABPN1-202ENST00000397276 ZNF585AQ6P3V2 769 aa20.6■□□□□ 0.89
PABPN1-202ENST00000397276 CPEB3Q8NE35 698 aaKnown RBP20.6■□□□□ 0.89
PABPN1-202ENST00000397276 EMG1Q92979 244 aaKnown RBP20.6■□□□□ 0.89
PABPN1-202ENST00000397276 NRIP2Q9BQI9 281 aa20.6■□□□□ 0.89
PABPN1-202ENST00000397276 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.6■□□□□ 0.89
PABPN1-202ENST00000397276 GSKIPQ9P0R6 139 aa20.6■□□□□ 0.89
PABPN1-202ENST00000397276 URB1O60287 2271 aaKnown RBP20.6■□□□□ 0.89
PABPN1-202ENST00000397276 MSTNO14793 375 aa20.6■□□□□ 0.89
PABPN1-202ENST00000397276 FOXG1P55316 489 aaPredicted RBP20.6■□□□□ 0.89
PABPN1-202ENST00000397276 PEG10Q86TG7 708 aaKnown RBP20.6■□□□□ 0.89
PABPN1-202ENST00000397276 SEC11CQ9BY50 192 aa20.6■□□□□ 0.89
PABPN1-202ENST00000397276 RHOFQ9HBH0 211 aa20.6■□□□□ 0.89
PABPN1-202ENST00000397276 MMP26Q9NRE1 261 aa20.6■□□□□ 0.89
PABPN1-202ENST00000397276 SLC7A10Q9NS82 523 aa20.6■□□□□ 0.89
PABPN1-202ENST00000397276 BDP1A6H8Y1 2624 aa20.6■□□□□ 0.89
PABPN1-202ENST00000397276 GEMIN2O14893 280 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms