RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CD80P33681 288 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 SULT1A2P50226 295 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 CEBPGP53567 150 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 UCP2P55851 309 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 ZNF121P58317 390 aaPredicted RBP4.68□□□□□ -1.66
VPS41-203ENST00000395969 TCF15Q12870 199 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 RHEBQ15382 184 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 FAHD2BQ6P2I3 314 aaPredicted RBP4.68□□□□□ -1.66
VPS41-203ENST00000395969 HEPN1Q6WQI6 88 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 TMED4Q7Z7H5 227 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 UBAC2Q8NBM4 344 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 OR10S1Q8NGN2 331 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 OR8S1Q8NH09 359 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 MRGPRFQ96AM1 343 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 ZMYND19Q96E35 227 aaPredicted RBP4.68□□□□□ -1.66
VPS41-203ENST00000395969 SEH1LQ96EE3 360 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 FAHD2AQ96GK7 314 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 JSRP1Q96MG2 331 aaPredicted RBP4.68□□□□□ -1.66
VPS41-203ENST00000395969 MRPL37Q9BZE1 423 aaKnown RBP4.68□□□□□ -1.66
VPS41-203ENST00000395969 PRDM14Q9GZV8 571 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 ATG5Q9H1Y0 275 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 OR2S2Q9NQN1 319 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 DECR2Q9NUI1 292 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 VSIG4Q9Y279 399 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 STARD10Q9Y365 291 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 CSAG2Q9Y5P2 127 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 ABCA7Q8IZY2 2146 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 A0A087WV48 116 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 A0A0B4J2A0 478 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 XKRYO14609 159 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 TBPP20226 339 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 LHX2P50458 406 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 BATFQ16520 125 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 TRAT1Q6PIZ9 186 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 CLEC2AQ6UVW9 174 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 FAM220AQ7Z4H9 259 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 UEVLDQ8IX04 471 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 FAM89BQ8N5H3 189 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 CISD2Q8N5K1 135 aaKnown RBP4.68□□□□□ -1.66
VPS41-203ENST00000395969 FAM24BQ8N5W8 94 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 METTL27Q8N6F8 245 aaPredicted RBP4.68□□□□□ -1.66
VPS41-203ENST00000395969 OR5AK2Q8NH90 309 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 ASB5Q8WWX0 329 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 MAFIPQ8WZ33 124 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 AQP10Q96PS8 301 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 NELFAQ9H3P2 528 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 SHPKQ9UHJ6 478 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 BOKQ9UMX3 212 aaPredicted RBP4.68□□□□□ -1.66
VPS41-203ENST00000395969 PTRH2Q9Y3E5 179 aaKnown RBP4.68□□□□□ -1.66
VPS41-203ENST00000395969 LHFPL6Q9Y693 200 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 BRWD1Q9NSI6 2320 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 PCNX3Q9H6A9 2034 aa4.68□□□□□ -1.66
VPS41-203ENST00000395969 TRAV8-7A0A075B6U6 113 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 TRAV18A0A075B6X5 111 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 A6NNC1 897 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 H0YIZ8 118 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 RRP8O43159 456 aaKnown RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 CSN2P05814 226 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 HCKP08631 526 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 GCH1P30793 250 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 SULT1A1P50225 295 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 RRADP55042 308 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 CLDN18P56856 261 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 NUTF2P61970 127 aaKnown RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 PPP1R1AQ13522 171 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 COTL1Q14019 142 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 ENDOGQ14249 297 aaKnown RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 CRIP3Q6Q6R5 217 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 Q6ZS49 121 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 WDFY1Q8IWB7 410 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 PRR18Q8N4B5 295 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 ZDHHC22Q8N966 263 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 ZNF511Q8NB15 262 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 OR9K2Q8NGE7 335 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 SECTM1Q8WVN6 248 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 DCUN1D4Q92564 292 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 PHB2Q99623 299 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 ABHD6Q9BV23 337 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 TM2D1Q9BX74 207 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 SLC5A7Q9GZV3 580 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FN3KRPQ9HA64 309 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 IL17BQ9UHF5 180 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 URGCP-MRPS24S4R325 110 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 RTTNQ86VV8 2226 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 SEC14L6B5MCN3 397 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 ZNF878C9JN71 531 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 AMY2AP04746 511 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 CCL3P10147 92 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 RPL4P36578 427 aaKnown RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 NAA10P41227 235 aaPredicted RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 CX3CR1P49238 355 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 RAB1AP62820 205 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 RNPS1Q15287 305 aaKnown RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 RNF151Q2KHN1 245 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 SCGB2B2Q4G0G5 96 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 ACTBL2Q562R1 376 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 WDR38Q5JTN6 314 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 DCAF10Q5QP82 559 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 C1QL3Q5VWW1 255 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms