RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ENTHD1Q8IYW4 607 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 PQLC1Q8N2U9 271 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 DNAAF1Q8NEP3 725 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 OR5R1Q8NH85 324 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 STMN2Q93045 179 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 SLAMF9Q96A28 289 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 FGGYQ96C11 551 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 MBOAT4Q96T53 435 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 ZNF696Q9H7X3 374 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 FRRS1LQ9P0K9 344 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 ZNRD1Q9P1U0 126 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 GLS2Q9UI32 602 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 VPREB3Q9UKI3 123 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 HHLA2Q9UM44 414 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 EXOGQ9Y2C4 368 aaKnown RBP11.25□□□□□ -0.61
CXCL12-205ENST00000395794 J3QRE1 110 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 K7N7A8 449 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 BAG2O95816 211 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 LGALS4P56470 323 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 ERVFRD-1P60508 538 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 COL10A1Q03692 680 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 PRR31Q5SQ13 230 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 DHRS7BQ6IAN0 325 aaPredicted RBP11.24□□□□□ -0.61
CXCL12-205ENST00000395794 PNKDQ8N490 385 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 ZNF676Q8N7Q3 588 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 ZSCAN4Q8NAM6 433 aaPredicted RBP11.24□□□□□ -0.61
CXCL12-205ENST00000395794 ZNF555Q8NEP9 628 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 OR13C3Q8NGS6 347 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 EMG1Q92979 244 aaKnown RBP11.24□□□□□ -0.61
CXCL12-205ENST00000395794 SPSB1Q96BD6 273 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 LGALS12Q96DT0 336 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 C4orf36Q96KX1 117 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 MTCH1Q9NZJ7 389 aa11.24□□□□□ -0.61
CXCL12-205ENST00000395794 LOC100130705A0A1B0GUX0 176 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 DBTP11182 482 aaKnown RBP11.23□□□□□ -0.61
CXCL12-205ENST00000395794 PIPP12273 146 aaPredicted RBP11.23□□□□□ -0.61
CXCL12-205ENST00000395794 ATF1P18846 271 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 AZGP1P25311 298 aaKnown RBP11.23□□□□□ -0.61
CXCL12-205ENST00000395794 POU3F4P49335 361 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 EDDM3BP56851 147 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 ZNF91Q05481 1191 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 RAB40BQ12829 278 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 MRPL28Q13084 256 aaKnown RBP11.23□□□□□ -0.61
CXCL12-205ENST00000395794 GALEQ14376 348 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 TAF9Q16594 264 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 LHFPL2Q6ZUX7 228 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 UTS2BQ765I0 119 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 LHFPL3Q86UP9 236 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 BEND2Q8NDZ0 799 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 RHOXF1Q8NHV9 184 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 ADAT3Q96EY9 351 aaPredicted RBP11.23□□□□□ -0.61
CXCL12-205ENST00000395794 ALG8Q9BVK2 526 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 INPP5EQ9NRR6 644 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 RPL36Q9Y3U8 105 aaKnown RBP11.23□□□□□ -0.61
CXCL12-205ENST00000395794 RNF114Q9Y508 228 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 PCDHGB5Q9Y5G0 923 aa11.23□□□□□ -0.61
CXCL12-205ENST00000395794 IGKV1-27A0A075B6S5 117 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 E9PQ18 207 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 GABRR1P24046 479 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 COX7A1P24310 79 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 PEX2P28328 305 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 TGFBR2P37173 567 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 GBX2P52951 348 aaPredicted RBP11.22□□□□□ -0.61
CXCL12-205ENST00000395794 NANOS3P60323 173 aaKnown RBP11.22□□□□□ -0.61
CXCL12-205ENST00000395794 RELBQ01201 579 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 ALKBH1Q13686 389 aaKnown RBP11.22□□□□□ -0.61
CXCL12-205ENST00000395794 KLHL22Q53GT1 634 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 BRICD5Q6PL45 260 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 OR8H2Q8N162 312 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 FAM58AQ8N1B3 248 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 SYS1Q8N2H4 156 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 PPP1R35Q8TAP8 253 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 HAVCR2Q8TDQ0 301 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 WFDC12Q8WWY7 111 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 PELI1Q96FA3 418 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 SNX22Q96L94 193 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 OPALINQ96PE5 141 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 SLC29A1Q99808 456 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 COMMD4Q9H0A8 199 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 AMBNQ9NP70 447 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 FAM118AQ9NWS6 357 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 AASSQ9UDR5 926 aa11.22□□□□□ -0.61
CXCL12-205ENST00000395794 hADV38S2A0JD32 116 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 F8VVB4 439 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 F8VWA3 439 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 H3BUX3 64 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 HAND1O96004 215 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 CCDC159P0C7I6 412 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 CCL3L1P16619 93 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 GABRB1P18505 474 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 MEF2CQ06413 473 aaPredicted RBP11.21□□□□□ -0.61
CXCL12-205ENST00000395794 PDZK1IP1Q13113 114 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 EDDM3AQ14507 147 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 SPIN3Q5JUX0 258 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 HCP5Q6MZN7 132 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 OR13D1Q8NGV5 346 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 RDH12Q96NR8 316 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 SSX3Q99909 188 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 ERVK13-1Q9NX77 482 aa11.21□□□□□ -0.61
CXCL12-205ENST00000395794 IGKV1-9A0A0C4DH69 117 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms