RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 MEIKINA0A087WXM9 373 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 IGHV3-15A0A0B4J1V0 119 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 MDFIC2A0A1B0GVS7 189 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 SLC22A20A6NK97 555 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 AP3B1O00203 1094 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 ZW10O43264 779 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 ZNF737O75373 536 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 POP7O75817 140 aaKnown RBP-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 CRPP02741 224 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 SOD3P08294 240 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 CALCBP10092 127 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 MYL9P24844 172 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 GGT2P36268 569 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 MYCNOSP40205 109 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 RGS4P49798 205 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 CCNHP51946 323 aaPredicted RBP-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 ZNF137PP52743 207 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 KDSRQ06136 332 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 CBX3Q13185 183 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 TMEM249Q2WGJ8 235 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 LGALS9BQ3B8N2 356 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 C6orf52Q5T4I8 152 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 TTC23Q5W5X9 447 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 KDELC1Q6UW63 502 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 RBM43Q6ZSC3 357 aaKnown RBP-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 CBLN2Q8IUK8 224 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 SLC22A9Q8IVM8 553 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 C1orf158Q8N1D5 194 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 ERMNQ8TAM6 284 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 NDNFQ8TB73 568 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 FAM131CQ96AQ9 280 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 ZC2HC1AQ96GY0 325 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 IFT74Q96LB3 600 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 PECRQ9BY49 303 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 C8orf4Q9NR00 106 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 LINC00588Q9Y4M8 146 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 SNURFQ9Y675 71 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 MCM3APO60318 1980 aa-1.62□□□□□ -2.67
MIR548A3-201ENST00000385297 UBN2Q6ZU65 1347 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 ZNF638Q14966 1978 aaKnown RBP-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 IGKV1-12A0A0C4DH73 117 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 C19orf84I3L1E1 186 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 CLOCKO15516 846 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 FLOT1O75955 427 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 TMEM50AO95807 157 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 IGKV1D-12P01611 117 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 PGA5P0DJD9 388 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 BCKDHBP21953 392 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 USF1P22415 310 aaPredicted RBP-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 CCND2P30279 289 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 HOXA6P31267 233 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 IFNA8P32881 189 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 RWDD2BP57060 319 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 ZMYND11Q15326 602 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 AGTRAPQ6RW13 159 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 UQCC3Q6UW78 93 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 Q6ZS92 163 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 ZFAND2AQ8N6M9 145 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 OR8B12Q8NGG6 310 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 PLPPR1Q8TBJ4 325 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 FGF20Q9NP95 211 aaPredicted RBP-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 HEBP1Q9NRV9 189 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 TAC3Q9UHF0 121 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 LGALS13Q9UHV8 139 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 JPT1Q9UK76 154 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 URGCP-MRPS24S4R325 110 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 ARAP3Q8WWN8 1544 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 EML6Q6ZMW3 1958 aa-1.63□□□□□ -2.67
MIR548A3-201ENST00000385297 SPAG9O60271 1321 aaKnown RBP-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 LOC285556D6RIA3 1793 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 NIPBLQ6KC79 2804 aaeCLIP-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 SCN9AQ15858 1988 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 A0A1W2PPE3 182 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 ARPC3O15145 178 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 MAPK13O15264 365 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 RGS5O15539 181 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 PTBP3O95758 552 aaKnown RBP-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 MT-ND3P03897 115 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 CD2P06729 351 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 OR4Q2P0C623 313 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 PGA4P0DJD7 388 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 PGA3P0DJD8 388 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 ESDP10768 282 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 NCK1P16333 377 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 GLRA2P23416 452 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 CXCR1P25024 350 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 CCT3P49368 545 aaKnown RBP-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 IDH3GP51553 393 aaPredicted RBP-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 EFNA4P52798 201 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 STXBP1P61764 594 aaKnown RBP-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 ZNF117Q03924 483 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 SLC38A11Q08AI6 406 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 HTR4Q13639 388 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 FAM229BQ4G0N7 80 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 GCSAMLQ5JQS6 135 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 OR10W1Q8NGF6 305 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 OR5B3Q8NH48 314 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 LINC00526Q96FQ7 95 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 SMARCD1Q96GM5 515 aa-1.64□□□□□ -2.67
MIR548A3-201ENST00000385297 TM6SF2Q9BZW4 377 aa-1.64□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms