RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 TCF19Q9Y242 345 aa13.62□□□□□ -0.23
SMN2-201ENST00000380741 TBL2Q9Y4P3 447 aaKnown RBP13.62□□□□□ -0.23
SMN2-201ENST00000380741 DNAH3Q8TD57 4116 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 G3V2T6 193 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 SYT7O43581 403 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 INMTO95050 263 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 RBP4P02753 201 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 CHRM2P08172 466 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 EDDM3BP56851 147 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 FAM189A2Q15884 450 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 ATP6AP1Q15904 470 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 SSX2Q16385 188 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 KPRPQ5T749 579 aaPredicted RBP13.61□□□□□ -0.23
SMN2-201ENST00000380741 ZNF626Q68DY1 528 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 KDM4DQ6B0I6 523 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 GDPD3Q7L5L3 318 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 TCF23Q7RTU1 214 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 TMEM219Q86XT9 240 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 DTX3Q8N9I9 347 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 OR11H6Q8NGC7 330 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 SLAMF9Q96A28 289 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 MALSU1Q96EH3 234 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 CEP19Q96LK0 163 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 ABCB10Q9NRK6 738 aa13.61□□□□□ -0.23
SMN2-201ENST00000380741 A0A1W2PQL4 384 aaPredicted RBP13.6□□□□□ -0.23
SMN2-201ENST00000380741 TMEM82A0PJX8 343 aa13.6□□□□□ -0.23
SMN2-201ENST00000380741 A6NDX4 124 aa13.6□□□□□ -0.23
SMN2-201ENST00000380741 APOL3O95236 402 aa13.6□□□□□ -0.23
SMN2-201ENST00000380741 IGHV1-8P0DP01 117 aa13.6□□□□□ -0.23
SMN2-201ENST00000380741 OR8H2Q8N162 312 aa13.6□□□□□ -0.23
SMN2-201ENST00000380741 Q8N2B8 174 aa13.6□□□□□ -0.23
SMN2-201ENST00000380741 RPS4Y2Q8TD47 263 aa13.6□□□□□ -0.23
SMN2-201ENST00000380741 ZNF714Q96N38 554 aa13.6□□□□□ -0.23
SMN2-201ENST00000380741 CDCA4Q9BXL8 241 aa13.6□□□□□ -0.23
SMN2-201ENST00000380741 CHST5Q9GZS9 411 aa13.6□□□□□ -0.23
SMN2-201ENST00000380741 GABARAPL1Q9H0R8 117 aa13.6□□□□□ -0.23
SMN2-201ENST00000380741 WARS2Q9UGM6 360 aaKnown RBP13.6□□□□□ -0.23
SMN2-201ENST00000380741 METTL15A6NJ78 407 aa13.59□□□□□ -0.23
SMN2-201ENST00000380741 FBXO24O75426 580 aa13.59□□□□□ -0.23
SMN2-201ENST00000380741 GATBO75879 557 aaKnown RBP13.59□□□□□ -0.23
SMN2-201ENST00000380741 PRB2P02812 416 aaPredicted RBP13.59□□□□□ -0.23
SMN2-201ENST00000380741 CD28P10747 220 aa13.59□□□□□ -0.23
SMN2-201ENST00000380741 DYNC1I2Q13409 638 aaKnown RBP13.59□□□□□ -0.23
SMN2-201ENST00000380741 EDDM3AQ14507 147 aa13.59□□□□□ -0.23
SMN2-201ENST00000380741 CNN3Q15417 329 aaKnown RBP13.59□□□□□ -0.23
SMN2-201ENST00000380741 NSUN5P1Q3KNT7 163 aa13.59□□□□□ -0.23
SMN2-201ENST00000380741 SLC25A26Q70HW3 274 aa13.59□□□□□ -0.23
SMN2-201ENST00000380741 CIB1Q99828 191 aa13.59□□□□□ -0.23
SMN2-201ENST00000380741 IL36RNQ9UBH0 155 aa13.59□□□□□ -0.23
SMN2-201ENST00000380741 SULT1C4O75897 302 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 OR2T7P0C7T2 308 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 JUNBP17275 347 aaPredicted RBP13.58□□□□□ -0.24
SMN2-201ENST00000380741 HTR1FP30939 366 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 FUT6P51993 359 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 MEF2CQ06413 473 aaPredicted RBP13.58□□□□□ -0.24
SMN2-201ENST00000380741 ZDHHC13Q8IUH4 622 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 EGFL6Q8IUX8 553 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 PRSS35Q8N3Z0 413 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 TPRX1Q8N7U7 411 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 OR10H4Q8NGA5 316 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 BCAS4Q8TDM0 211 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 WIPF2Q8TF74 440 aaPredicted RBP13.58□□□□□ -0.24
SMN2-201ENST00000380741 EMG1Q92979 244 aaKnown RBP13.58□□□□□ -0.24
SMN2-201ENST00000380741 BORCS8Q96FH0 119 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 SNX22Q96L94 193 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 CHST6Q9GZX3 395 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 ENOPH1Q9UHY7 261 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 PITPNC1Q9UKF7 332 aa13.58□□□□□ -0.24
SMN2-201ENST00000380741 LOC107986453A0A1B0GWG9 222 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 hADV38S2A0JD32 116 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 HAND1O96004 215 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 IGHA1P01876 353 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 FASP25445 335 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 POLR2IP36954 125 aaKnown RBP13.57□□□□□ -0.24
SMN2-201ENST00000380741 DYNLT3P51808 116 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 ACTA2P62736 377 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 ACTG2P63267 376 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 ACTC1P68032 377 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 ACTA1P68133 377 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 Q6ZS46 218 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 AMIGO2Q86SJ2 522 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 ZNF676Q8N7Q3 588 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 CCDC54Q8NEL0 328 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 OR52N4Q8NGI2 321 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 OR5M11Q96RB7 305 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 ADI1Q9BV57 179 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 PRSS22Q9GZN4 317 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 MMP28Q9H239 520 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 RBFOX1Q9NWB1 397 aaKnown RBP13.57□□□□□ -0.24
SMN2-201ENST00000380741 HILPDAQ9Y5L2 63 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 LINC00312Q9Y6C7 94 aa13.57□□□□□ -0.24
SMN2-201ENST00000380741 IGHV2-26A0A0B4J1V2 119 aa13.56□□□□□ -0.24
SMN2-201ENST00000380741 F2RL2O00254 374 aa13.56□□□□□ -0.24
SMN2-201ENST00000380741 PSPNO60542 156 aa13.56□□□□□ -0.24
SMN2-201ENST00000380741 SERPINA3P01011 423 aa13.56□□□□□ -0.24
SMN2-201ENST00000380741 GABRR1P24046 479 aa13.56□□□□□ -0.24
SMN2-201ENST00000380741 ATP6V1E1P36543 226 aa13.56□□□□□ -0.24
SMN2-201ENST00000380741 KIR3DL2P43630 455 aa13.56□□□□□ -0.24
SMN2-201ENST00000380741 NPBWR2P48146 333 aa13.56□□□□□ -0.24
SMN2-201ENST00000380741 OR12D2P58182 307 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms