RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 MOB3CQ70IA8 216 aa18.62■□□□□ 0.57
TRIM54-202ENST00000380075 OSR2Q8N2R0 312 aa18.62■□□□□ 0.57
TRIM54-202ENST00000380075 DHRS9Q9BPW9 319 aa18.62■□□□□ 0.57
TRIM54-202ENST00000380075 RDH8Q9NYR8 311 aa18.62■□□□□ 0.57
TRIM54-202ENST00000380075 C14orf166Q9Y224 244 aaKnown RBP18.62■□□□□ 0.57
TRIM54-202ENST00000380075 CACNA1GO43497 2377 aa18.62■□□□□ 0.57
TRIM54-202ENST00000380075 SDCBPO00560 298 aaPredicted RBP18.62■□□□□ 0.57
TRIM54-202ENST00000380075 PSMB6P28072 239 aa18.62■□□□□ 0.57
TRIM54-202ENST00000380075 ARPC4P59998 168 aa18.62■□□□□ 0.57
TRIM54-202ENST00000380075 LRRC37A5PQ49AS3 106 aa18.62■□□□□ 0.57
TRIM54-202ENST00000380075 RGS7BPQ6MZT1 257 aaPredicted RBP18.62■□□□□ 0.57
TRIM54-202ENST00000380075 ZFP62Q8NB50 900 aaPredicted RBP18.62■□□□□ 0.57
TRIM54-202ENST00000380075 FNDC9Q8TBE3 224 aa18.62■□□□□ 0.57
TRIM54-202ENST00000380075 PCNPQ8WW12 178 aaKnown RBP18.62■□□□□ 0.57
TRIM54-202ENST00000380075 SLX1AQ9BQ83 275 aa18.62■□□□□ 0.57
TRIM54-202ENST00000380075 CHMP1AQ9HD42 196 aaPredicted RBP18.62■□□□□ 0.57
TRIM54-202ENST00000380075 ANXA10Q9UJ72 324 aa18.62■□□□□ 0.57
TRIM54-202ENST00000380075 A0A1B0GW55 424 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 EEF1E1-BLOC1S5C9J1V9 151 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 DUX4L2P0CJ85 424 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 DUX4L3P0CJ86 424 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 DUX4L4P0CJ87 422 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 DUX4L5P0CJ88 424 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 DUX4L6P0CJ89 424 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 DUX4L7P0CJ90 424 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 ARR3P36575 388 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 PMELP40967 661 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 PPIAP62937 165 aaKnown RBP18.61■□□□□ 0.57
TRIM54-202ENST00000380075 TAF9Q16594 264 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 INO80EQ8NBZ0 244 aaPredicted RBP18.61■□□□□ 0.57
TRIM54-202ENST00000380075 ST8SIA2Q92186 375 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 PIGCQ92535 297 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 RBPMSQ93062 196 aaKnown RBP18.61■□□□□ 0.57
TRIM54-202ENST00000380075 ABHD17AQ96GS6 310 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 VRK1Q99986 396 aaPredicted RBP18.61■□□□□ 0.57
TRIM54-202ENST00000380075 CMSS1Q9BQ75 279 aaKnown RBP18.61■□□□□ 0.57
TRIM54-202ENST00000380075 SLC25A32Q9H2D1 315 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 DECR2Q9NUI1 292 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 DUX4Q9UBX2 424 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 BSNQ9UPA5 3926 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 TRBV6-7A0A0A0MS04 114 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 RNF222A6NCQ9 220 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 SUPT4H1P63272 117 aaKnown RBP18.61■□□□□ 0.57
TRIM54-202ENST00000380075 SLC10A1Q14973 349 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 DPPA2Q7Z7J5 298 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 MCEMP1Q8IX19 187 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 PHYHIPLQ96FC7 376 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 PFDN2Q9UHV9 154 aa18.61■□□□□ 0.57
TRIM54-202ENST00000380075 MKRN2OSH3BPM6 223 aa18.6■□□□□ 0.57
TRIM54-202ENST00000380075 K7EM74 188 aa18.6■□□□□ 0.57
TRIM54-202ENST00000380075 PDZD9Q8IXQ8 264 aa18.6■□□□□ 0.57
TRIM54-202ENST00000380075 MAFIPQ8WZ33 124 aa18.6■□□□□ 0.57
TRIM54-202ENST00000380075 APOBEC3DQ96AK3 386 aaPredicted RBP18.6■□□□□ 0.57
TRIM54-202ENST00000380075 CYYR1Q96J86 154 aa18.6■□□□□ 0.57
TRIM54-202ENST00000380075 REPIN1Q9BWE0 567 aaKnown RBP18.6■□□□□ 0.57
TRIM54-202ENST00000380075 OPA3Q9H6K4 179 aa18.6■□□□□ 0.57
TRIM54-202ENST00000380075 AK3Q9UIJ7 227 aa18.6■□□□□ 0.57
TRIM54-202ENST00000380075 SESN1Q9Y6P5 492 aa18.6■□□□□ 0.57
TRIM54-202ENST00000380075 C13orf42A0A1B0GVH6 325 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 SPDEFO95238 335 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 PLATP00750 562 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 PGAM2P15259 253 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 MALLQ13021 153 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 FAAP24Q9BTP7 215 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 NECAP2Q9NVZ3 263 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 MBD2Q9UBB5 411 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 CACNA1BQ00975 2339 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 IGKV1-12A0A0C4DH73 117 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 IGKV1D-12P01611 117 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 CTSDP07339 412 aaPredicted RBP18.59■□□□□ 0.57
TRIM54-202ENST00000380075 RPS2P15880 293 aaKnown RBP18.59■□□□□ 0.57
TRIM54-202ENST00000380075 SLC9A3R2Q15599 337 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 WBP1Q96G27 269 aa18.59■□□□□ 0.57
TRIM54-202ENST00000380075 PIEZO2Q9H5I5 2752 aa18.58■□□□□ 0.57
TRIM54-202ENST00000380075 FAM90A10PA6NDY2 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A18PA6NE21 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A16PA6NEW6 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 MFSD2BA6NFX1 497 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A20PA6NIJ5 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A8PA6NJQ4 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A7PA6NKC0 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A22PA8MWA6 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A12PA8MX19 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A5PA8MXJ8 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A23PA8MXZ1 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 PRSS44E7EML9 344 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FCGR3AP08637 254 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A15PP0C7V4 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A13PP0C7W8 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A14PP0C7W9 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FAM90A24PP0C7X0 464 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 GLRA1P23415 457 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 BAMBIQ13145 260 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 FBXL14Q8N1E6 418 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 Q8NFD4 153 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 OR51F2Q8NH61 342 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 ZNF2Q9BSG1 426 aaPredicted RBP18.58■□□□□ 0.56
TRIM54-202ENST00000380075 GP6Q9HCN6 339 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 SDHAF2Q9NX18 166 aa18.58■□□□□ 0.56
TRIM54-202ENST00000380075 A0A096LPE4 126 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms