RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 AARDQ4LEZ3 155 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 LINC01590Q5TEZ4 76 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 ERASQ7Z444 233 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 FAM160A2Q8N612 972 aaPredicted RBP9.68□□□□□ -0.86
USP6NL-202ENST00000379237 OR2A1Q8NGT9 310 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 RNASE8Q8TDE3 154 aaKnown RBP9.68□□□□□ -0.86
USP6NL-202ENST00000379237 ANGPTL4Q9BY76 406 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 SH3BGRL2Q9UJC5 107 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 TTRP02766 147 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 DYNLT3P51808 116 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 ZNF439Q8NDP4 499 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 OR56B2PQ8NGI1 322 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 OR1N1Q8NGS0 311 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 IRF7Q92985 503 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 SPACA7Q96KW9 195 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 DNAJB12Q9NXW2 375 aaKnown RBP9.68□□□□□ -0.86
USP6NL-202ENST00000379237 NUDT10Q8NFP7 164 aa9.68□□□□□ -0.86
USP6NL-202ENST00000379237 ZCCHC14Q8WYQ9 949 aaKnown RBP9.68□□□□□ -0.86
USP6NL-202ENST00000379237 DAZLQ92904 295 aaKnown RBP9.68□□□□□ -0.86
USP6NL-202ENST00000379237 HSBP1L1C9JCN9 74 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 TRAF3IP2O43734 574 aaPredicted RBP9.67□□□□□ -0.86
USP6NL-202ENST00000379237 PTGER4P35408 488 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 ZNF90Q03938 601 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 TLE3Q04726 772 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 IL24Q13007 206 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 MFSD9Q8NBP5 474 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 NECAP2Q9NVZ3 263 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 AURKAIP1Q9NWT8 199 aaPredicted RBP9.67□□□□□ -0.86
USP6NL-202ENST00000379237 PPIL1Q9Y3C6 166 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 BTAF1O14981 1849 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 LCTP09848 1927 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 LMX1BO60663 402 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 CT45A8P0DMV1 189 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 CT45A9P0DMV2 189 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 BCL2P10415 239 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 FCGR2AP12318 317 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 BRS3P32247 399 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 SPATA45Q537H7 98 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 CT45A2Q5DJT8 189 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 VAX1Q5SQQ9 334 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 LDLRAD2Q5SZI1 272 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 C1orf140Q5VVS0 124 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 TCTEX1D1Q8N7M0 179 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 TMEM230Q96A57 120 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 ADOQ96SZ5 270 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 STARD5Q9NSY2 213 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 MYO16Q9Y6X6 1858 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 CASP8AP2Q9UKL3 1982 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 IGLON5A6NGN9 336 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 DIRC3C9JPN6 131 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 ZNF737O75373 536 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 CRISP2P16562 243 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 HNRNPA2B1P22626 353 aaKnown RBP9.67□□□□□ -0.86
USP6NL-202ENST00000379237 SPRED2Q7Z698 418 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 PRR22Q8IZ63 422 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 TSPAN32Q96QS1 320 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 DAPP1Q9UN19 280 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 SRPK3Q9UPE1 567 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 PPIAL4AQ9Y536 164 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 CEP290O15078 2479 aa9.67□□□□□ -0.86
USP6NL-202ENST00000379237 ZNF816-ZNF321PA0A0X1KG74 233 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 GRIFINA4D1Z8 144 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 C8AP07357 584 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 KITLGP21583 273 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 AADACP22760 399 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 APOBEC1P41238 236 aaKnown RBP9.66□□□□□ -0.86
USP6NL-202ENST00000379237 AMTP48728 403 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 RPS4XP62701 263 aaKnown RBP9.66□□□□□ -0.86
USP6NL-202ENST00000379237 MRPS11P82912 194 aaKnown RBP9.66□□□□□ -0.86
USP6NL-202ENST00000379237 EMC4Q5J8M3 183 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 CARD17Q5XLA6 110 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 SLC38A9Q8NBW4 561 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 OR9A4Q8NGU2 314 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 GPR84Q9NQS5 396 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 MTCH2Q9Y6C9 303 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 PRSS37A4D1T9 235 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 MPZL1O95297 269 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 OR3A4PP47883 348 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 ICAM4Q14773 271 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 ZNF506Q5JVG8 444 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 OR4A47Q6IF82 309 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 LINC01555Q8NAE3 123 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 ADIPOR1Q96A54 375 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 RFNGQ9Y644 331 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 GREB1Q4ZG55 1949 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 SCN5AQ14524 2016 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 A0A1W2PP11 408 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 DUXBA0A1W2PPF3 345 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 RAB29O14966 203 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 HRASP01112 189 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 C1orf185Q5T7R7 199 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 ZNF468Q5VIY5 522 aaPredicted RBP9.66□□□□□ -0.86
USP6NL-202ENST00000379237 NPSR1Q6W5P4 371 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 ZNF765Q7L2R6 523 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 ZNF547Q8IVP9 402 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 ARHGEF39Q8N4T4 335 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 RNASEH2CQ8TDP1 164 aaKnown RBP9.66□□□□□ -0.86
USP6NL-202ENST00000379237 IGSF21Q96ID5 467 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 ZNF681Q96N22 645 aa9.66□□□□□ -0.86
USP6NL-202ENST00000379237 NAA60Q9H7X0 242 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 602 ms