RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 DEFB127Q9H1M4 99 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 IL36GQ9NZH8 169 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 OR5AC2Q9NZP5 309 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 KLF13Q9Y2Y9 288 aaPredicted RBP16.17■□□□□ 0.18
USP49-202ENST00000373010 A8MXK9 166 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 ZNF806P0C7X5 589 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 ZP3P21754 424 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 TGIF1Q15583 401 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 FER1L6-AS2Q96M78 137 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 FGF23Q9GZV9 251 aaPredicted RBP16.17■□□□□ 0.18
USP49-202ENST00000373010 GSKIPQ9P0R6 139 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 ATPIF1Q9UII2 106 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 NUP50Q9UKX7 468 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 SESN1Q9Y6P5 492 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 ARHGAP21Q5T5U3 1957 aa16.17■□□□□ 0.18
USP49-202ENST00000373010 FAM186AA6NE01 2351 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 ZNF724A8MTY0 619 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 IFNA2P01563 188 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 FGF2P09038 288 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 DTYMKP23919 212 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 RBM11P57052 281 aaKnown RBP16.16■□□□□ 0.18
USP49-202ENST00000373010 POC1AQ8NBT0 407 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 BVESQ8NE79 360 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 C2orf50Q96LR7 162 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 REPIN1Q9BWE0 567 aaKnown RBP16.16■□□□□ 0.18
USP49-202ENST00000373010 NECAP2Q9NVZ3 263 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 ZNF629Q9UEG4 869 aaPredicted RBP16.16■□□□□ 0.18
USP49-202ENST00000373010 MSGN1A6NI15 193 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 ARGFXA6NJG6 315 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 KLRC4-KLRK1H3BQV0 150 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 CTSDP07339 412 aaPredicted RBP16.16■□□□□ 0.18
USP49-202ENST00000373010 DAZAP2Q15038 168 aaPredicted RBP16.16■□□□□ 0.18
USP49-202ENST00000373010 SLC22A25Q6T423 547 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 TOMM40LQ969M1 308 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 IP6K3Q96PC2 410 aa16.16■□□□□ 0.18
USP49-202ENST00000373010 TEX13DA0A0J9YY54 714 aaPredicted RBP16.15■□□□□ 0.18
USP49-202ENST00000373010 NGFP01138 241 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 NUP62P37198 522 aaPredicted RBP16.15■□□□□ 0.18
USP49-202ENST00000373010 RAB1AP62820 205 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 SPEM2Q0P670 501 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 PRDX4Q13162 271 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 RAB32Q13637 225 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 TUSC1Q2TAM9 212 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 Q6ZPA2 131 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 MCEMP1Q8IX19 187 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.15■□□□□ 0.18
USP49-202ENST00000373010 MRPS24Q96EL2 167 aaKnown RBP16.15■□□□□ 0.18
USP49-202ENST00000373010 TECTBQ96PL2 329 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 DHRS9Q9BPW9 319 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 C12orf49Q9H741 205 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 PRSS50Q9UI38 385 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 PDCD6O75340 191 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 RBMXP38159 391 aaKnown RBP16.15■□□□□ 0.18
USP49-202ENST00000373010 MALLQ13021 153 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 SLC10A1Q14973 349 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 PRSS54Q6PEW0 395 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 PIK3IP1Q96FE7 263 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 FAM117AQ9C073 453 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 STARD10Q9Y365 291 aa16.15■□□□□ 0.18
USP49-202ENST00000373010 ARID1AO14497 2285 aa16.14■□□□□ 0.18
USP49-202ENST00000373010 OR7C1O76099 320 aaPredicted RBP16.14■□□□□ 0.17
USP49-202ENST00000373010 ECI1P42126 302 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 FXYD4P59646 89 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 SNTB1Q13884 538 aaKnown RBP16.14■□□□□ 0.17
USP49-202ENST00000373010 RBM39Q14498 530 aaKnown RBP16.14■□□□□ 0.17
USP49-202ENST00000373010 RNFT1Q5M7Z0 435 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 MRPL21Q7Z2W9 205 aaKnown RBP16.14■□□□□ 0.17
USP49-202ENST00000373010 HSD17B13Q7Z5P4 300 aaPredicted RBP16.14■□□□□ 0.17
USP49-202ENST00000373010 SGPP2Q8IWX5 399 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 GALNT11Q8NCW6 608 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 SLAMF9Q96A28 289 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 DECR2Q9NUI1 292 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 PQLC2LA1A4F0 135 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 CRYM-AS1A6NIL9 109 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 GPM6AP51674 278 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 S100A10P60903 97 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 IL15RAQ13261 267 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 STK11Q15831 433 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 DHRS11Q6UWP2 260 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 HPSE2Q8WWQ2 592 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 PHYHIPLQ96FC7 376 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 LDAHQ9H6V9 325 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 RNF122Q9H9V4 155 aa16.14■□□□□ 0.17
USP49-202ENST00000373010 BARX1Q9HBU1 254 aaPredicted RBP16.14■□□□□ 0.17
USP49-202ENST00000373010 URB1O60287 2271 aaKnown RBP16.14■□□□□ 0.17
USP49-202ENST00000373010 CD46P15529 392 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 BCL3P20749 454 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 RNPS1Q15287 305 aaKnown RBP16.13■□□□□ 0.17
USP49-202ENST00000373010 TRIP6Q15654 476 aaKnown RBP16.13■□□□□ 0.17
USP49-202ENST00000373010 ELP2Q6IA86 826 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 FOXRED2Q8IWF2 684 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 ZFP62Q8NB50 900 aaPredicted RBP16.13■□□□□ 0.17
USP49-202ENST00000373010 APOBEC3DQ96AK3 386 aaPredicted RBP16.13■□□□□ 0.17
USP49-202ENST00000373010 HS3ST6Q96QI5 342 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 ZNF442Q9H7R0 627 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 C1orf123Q9NWV4 160 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 F8VVB4 439 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 F8VWA3 439 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 ZNF728P0DKX0 622 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 COX5BP10606 129 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms