RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 C6orf201Q7Z4U5 140 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.12□□□□□ -0.47
USF1-202ENST00000368020 KCNRGQ8N5I3 272 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 INO80EQ8NBZ0 244 aaPredicted RBP12.12□□□□□ -0.47
USF1-202ENST00000368020 Q8NFD4 153 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 OR13G1Q8NGZ3 307 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 PIGCQ92535 297 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 CMSS1Q9BQ75 279 aaKnown RBP12.12□□□□□ -0.47
USF1-202ENST00000368020 DECR2Q9NUI1 292 aa12.12□□□□□ -0.47
USF1-202ENST00000368020 MED19A0JLT2 244 aaPredicted RBP12.11□□□□□ -0.47
USF1-202ENST00000368020 C5orf51A6NDU8 294 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 SPRY1O43609 319 aaPredicted RBP12.11□□□□□ -0.47
USF1-202ENST00000368020 CFDP00746 253 aaPredicted RBP12.11□□□□□ -0.47
USF1-202ENST00000368020 CCL11P51671 97 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 TMPRSS3P57727 454 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 AADACL3Q5VUY0 350 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 IGFL2Q6UWQ7 119 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 KCTD9Q7L273 389 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 CCDC36Q8IYA8 594 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 OR5L1Q8NGL2 311 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 OR51F2Q8NH61 342 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 PHYHIPLQ96FC7 376 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 RAXQ9Y2V3 346 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 MEMO1Q9Y316 297 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 DNAJC13O75165 2243 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 C5orf49A4QMS7 147 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 SLC22A20A6NK97 555 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 FAM25EA8MYX2 175 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 C1QTNF9BB2RNN3 333 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 ANGPTL7O43827 346 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 SS18L1O75177 396 aaPredicted RBP12.11□□□□□ -0.47
USF1-202ENST00000368020 PDCD6O75340 191 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 C1QTNF9P0C862 333 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 CD79AP11912 226 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 PGAM2P15259 253 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 APLNRP35414 380 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 RBM11P57052 281 aaKnown RBP12.11□□□□□ -0.47
USF1-202ENST00000368020 RAB1AP62820 205 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 TAF9Q16594 264 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 DMRTC1Q5HYR2 192 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 FBXW9Q5XUX1 488 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 ELP2Q6IA86 826 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 CLEC18BQ6UXF7 455 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 RTN4RL2Q86UN3 420 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 COMMD7Q86VX2 200 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 TMEM200AQ86VY9 491 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 ZDHHC23Q8IYP9 409 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 FDCSPQ8NFU4 85 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 WDYHV1Q96HA8 205 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 PAPOLGQ9BWT3 736 aaKnown RBP12.11□□□□□ -0.47
USF1-202ENST00000368020 CHMP1AQ9HD42 196 aaPredicted RBP12.11□□□□□ -0.47
USF1-202ENST00000368020 ST3GAL6Q9Y274 331 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 SESN1Q9Y6P5 492 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 ASPMQ8IZT6 3477 aa12.11□□□□□ -0.47
USF1-202ENST00000368020 ACACBO00763 2458 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 MAP1BP46821 2468 aaKnown RBP12.1□□□□□ -0.47
USF1-202ENST00000368020 ZNF407Q9C0G0 2248 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 PQLC2LA1A4F0 135 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 BCL2L11O43521 198 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 CRHP06850 196 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 CTSDP07339 412 aaPredicted RBP12.1□□□□□ -0.47
USF1-202ENST00000368020 FCGR3AP08637 254 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 FUT3P21217 361 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 PSMB6P28072 239 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 TNFSF10P50591 281 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 SRSF7Q16629 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
USF1-202ENST00000368020 CEACAM21Q3KPI0 293 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 SIGIRRQ6IA17 410 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 TMEM211Q6ICI0 200 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 LINC00596Q86U02 117 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 MKXQ8IYA7 352 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 ZNF611Q8N823 705 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 OR56B2PQ8NGI1 322 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 TMEM230Q96A57 120 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 GMPPAQ96IJ6 420 aaPredicted RBP12.1□□□□□ -0.47
USF1-202ENST00000368020 POM121L2Q96KW2 1035 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 HIST1H2AAQ96QV6 131 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 RTBDNQ9BSG5 229 aaPredicted RBP12.1□□□□□ -0.47
USF1-202ENST00000368020 ZNF286AQ9HBT8 521 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 C12orf4Q9NQ89 552 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 C1orf123Q9NWV4 160 aa12.1□□□□□ -0.47
USF1-202ENST00000368020 ZNF230Q9UIE0 474 aaPredicted RBP12.1□□□□□ -0.47
USF1-202ENST00000368020 A0A096LPE4 126 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 A0A1W2PPZ6 126 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 ZNF850A8MQ14 1090 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 IFNA2P01563 188 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 HLA-HP01893 362 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 SERPINF1P36955 418 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 NUP62P37198 522 aaPredicted RBP12.09□□□□□ -0.47
USF1-202ENST00000368020 TGFBR3Q03167 851 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 DHRS11Q6UWP2 260 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 CCDC28AQ8IWP9 274 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 SGPP2Q8IWX5 399 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 FBXL14Q8N1E6 418 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 OR10AD1Q8NGE0 317 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 OR5A2Q8NGI9 324 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 OR1K1Q8NGR3 316 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 SLX1AQ9BQ83 275 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 SLC25A32Q9H2D1 315 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 PLK3Q9H4B4 646 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms