RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 RBM11P57052 281 aaKnown RBP22.77■■□□□ 1.24
SSBP4-202ENST00000348495 PIGYQ3MUY2 71 aa22.77■■□□□ 1.24
SSBP4-202ENST00000348495 CCDC190Q86UF4 302 aa22.77■■□□□ 1.24
SSBP4-202ENST00000348495 HPS1Q92902 700 aa22.77■■□□□ 1.24
SSBP4-202ENST00000348495 EMG1Q92979 244 aaKnown RBP22.77■■□□□ 1.24
SSBP4-202ENST00000348495 CCL19Q99731 98 aa22.77■■□□□ 1.24
SSBP4-202ENST00000348495 NICN1Q9BSH3 213 aa22.77■■□□□ 1.24
SSBP4-202ENST00000348495 DCAF16Q9NXF7 216 aa22.77■■□□□ 1.24
SSBP4-202ENST00000348495 RASL12Q9NYN1 266 aa22.77■■□□□ 1.24
SSBP4-202ENST00000348495 IL36RNQ9UBH0 155 aa22.77■■□□□ 1.24
SSBP4-202ENST00000348495 FBN2P35556 2912 aa22.77■■□□□ 1.24
SSBP4-202ENST00000348495 MRPS11P82912 194 aaKnown RBP22.77■■□□□ 1.23
SSBP4-202ENST00000348495 CNIH2Q6PI25 160 aa22.77■■□□□ 1.23
SSBP4-202ENST00000348495 POM121Q96HA1 1249 aa22.77■■□□□ 1.23
SSBP4-202ENST00000348495 URM1Q9BTM9 101 aaKnown RBP22.77■■□□□ 1.23
SSBP4-202ENST00000348495 ATG5Q9H1Y0 275 aa22.77■■□□□ 1.23
SSBP4-202ENST00000348495 LIME1Q9H400 295 aa22.77■■□□□ 1.23
SSBP4-202ENST00000348495 ST3GAL6Q9Y274 331 aa22.77■■□□□ 1.23
SSBP4-202ENST00000348495 LRRC30A6NM36 301 aa22.76■■□□□ 1.23
SSBP4-202ENST00000348495 IFNL4K9M1U5 179 aa22.76■■□□□ 1.23
SSBP4-202ENST00000348495 NXPH2O95156 264 aa22.76■■□□□ 1.23
SSBP4-202ENST00000348495 PRKACAP17612 351 aa22.76■■□□□ 1.23
SSBP4-202ENST00000348495 GLRA1P23415 457 aa22.76■■□□□ 1.23
SSBP4-202ENST00000348495 ZNF787Q6DD87 383 aa22.76■■□□□ 1.23
SSBP4-202ENST00000348495 ACP7Q6ZNF0 438 aa22.76■■□□□ 1.23
SSBP4-202ENST00000348495 S100A16Q96FQ6 103 aaKnown RBP22.76■■□□□ 1.23
SSBP4-202ENST00000348495 GAL3ST1Q99999 423 aa22.76■■□□□ 1.23
SSBP4-202ENST00000348495 TMEM106BQ9NUM4 274 aa22.76■■□□□ 1.23
SSBP4-202ENST00000348495 NPTNQ9Y639 398 aa22.76■■□□□ 1.23
SSBP4-202ENST00000348495 METTL21EPA6NDL7 271 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 FAM25AB3EWG3 89 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 FAM25CB3EWG5 89 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 FAM25GB3EWG6 89 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 RAB27BO00194 218 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 CYB5R3P00387 301 aaPredicted RBP22.75■■□□□ 1.23
SSBP4-202ENST00000348495 ETV6P41212 452 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 FAM189A2Q15884 450 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 OR4M1Q8NGD0 313 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 CCL17Q92583 94 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 YIPF5Q969M3 257 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 DIRAS2Q96HU8 199 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 CELSR2Q9HCU4 2923 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 CENPEQ02224 2701 aa22.75■■□□□ 1.23
SSBP4-202ENST00000348495 FOXI3A8MTJ6 420 aaPredicted RBP22.74■■□□□ 1.23
SSBP4-202ENST00000348495 TMEM178BH3BS89 294 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 CPT2P23786 658 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 KRTAP10-9P60411 292 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 GMFBP60983 142 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 MOGAT2Q3SYC2 334 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 SEH1LQ96EE3 360 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 SOSTQ9BQB4 213 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 EXTL2Q9UBQ6 330 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 USF3Q68DE3 2245 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 A0A0A6YYH2 397 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 A6NJ64 397 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 GEMIN2O14893 280 aaKnown RBP22.74■■□□□ 1.23
SSBP4-202ENST00000348495 RP2O75695 350 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 IRF2P14316 349 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 CDK2P24941 298 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 COL8A2P25067 703 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 ZNF146Q15072 292 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 TAF9Q16594 264 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 METAP1DQ6UB28 335 aaPredicted RBP22.74■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A1Q86YD7 464 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 NRGNQ92686 78 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 RDH5Q92781 318 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 CXorf56Q9H5V9 222 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 AKIP1Q9NQ31 210 aa22.74■■□□□ 1.23
SSBP4-202ENST00000348495 LY6HO94772 140 aa22.73■■□□□ 1.23
SSBP4-202ENST00000348495 F12P00748 615 aaPredicted RBP22.73■■□□□ 1.23
SSBP4-202ENST00000348495 CHRM2P08172 466 aa22.73■■□□□ 1.23
SSBP4-202ENST00000348495 VEGFCP49767 419 aa22.73■■□□□ 1.23
SSBP4-202ENST00000348495 IL13RA2Q14627 380 aa22.73■■□□□ 1.23
SSBP4-202ENST00000348495 HFEQ30201 348 aa22.73■■□□□ 1.23
SSBP4-202ENST00000348495 SMIM21Q3B7S5 101 aa22.73■■□□□ 1.23
SSBP4-202ENST00000348495 FAM201AQ5SY85 155 aa22.73■■□□□ 1.23
SSBP4-202ENST00000348495 NUDT16L1Q9BRJ7 211 aaKnown RBP22.73■■□□□ 1.23
SSBP4-202ENST00000348495 DLL4Q9NR61 685 aa22.73■■□□□ 1.23
SSBP4-202ENST00000348495 ZNF581Q9P0T4 197 aa22.73■■□□□ 1.23
SSBP4-202ENST00000348495 V9GYH0 126 aa22.73■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A10PA6NDY2 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A18PA6NE21 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A16PA6NEW6 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A20PA6NIJ5 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A8PA6NJQ4 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A7PA6NKC0 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A22PA8MWA6 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A12PA8MX19 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A5PA8MXJ8 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A23PA8MXZ1 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 XRCC3O43542 346 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 NDUFS7O75251 213 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 INHBBP09529 407 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A15PP0C7V4 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A13PP0C7W8 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A14PP0C7W9 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 FAM90A24PP0C7X0 464 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 PITPNBP48739 271 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 EFNA4P52798 201 aa22.72■■□□□ 1.23
SSBP4-202ENST00000348495 SPIN3Q5JUX0 258 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms