RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 FAM96BQ9Y3D0 163 aa13.86□□□□□ -0.19
BRCC3-202ENST00000340647 PRKDCP78527 4128 aaKnown RBP13.85□□□□□ -0.19
BRCC3-202ENST00000340647 IGKV1-12A0A0C4DH73 117 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 A0A1B0GUS0 222 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 C17orf98A8MV24 154 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 E9PI62 339 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 H0YAE9 185 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 SLC1A7O00341 560 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 CLPXO76031 633 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 IGKV1D-12P01611 117 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 IGHA1P01876 353 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 DBTP11182 482 aaKnown RBP13.85□□□□□ -0.19
BRCC3-202ENST00000340647 EEF1B2P24534 225 aaKnown RBP13.85□□□□□ -0.19
BRCC3-202ENST00000340647 BMXP51813 675 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 LHFPL3Q86UP9 236 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 ACBD7Q8N6N7 88 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 CCDC54Q8NEL0 328 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 OR5D13Q8NGL4 314 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 PPP1R35Q8TAP8 253 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 FGGYQ96C11 551 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 C10orf35Q96D05 121 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 C4orf36Q96KX1 117 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 CEP19Q96LK0 163 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 FAM234AQ9H0X4 552 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 MEGF9Q9H1U4 602 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 DPAGT1Q9H3H5 408 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 PLEKHA1Q9HB21 404 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 RBFOX1Q9NWB1 397 aaKnown RBP13.85□□□□□ -0.19
BRCC3-202ENST00000340647 SLC7A11Q9UPY5 501 aa13.85□□□□□ -0.19
BRCC3-202ENST00000340647 DAPL1A0PJW8 107 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 ANGPTL7O43827 346 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 PSPNO60542 156 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 TSPAN9O75954 239 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 CRYBA1P05813 215 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 CALCBP10092 127 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 PIPP12273 146 aaPredicted RBP13.84□□□□□ -0.19
BRCC3-202ENST00000340647 ATF1P18846 271 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 BCL3P20749 454 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 CCR9P51686 369 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 MIDNQ504T8 468 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 TMEM244Q5VVB8 128 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 UTS2BQ765I0 119 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 KCTD20Q7Z5Y7 419 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 PQLC1Q8N2U9 271 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 DNAAF1Q8NEP3 725 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 C16orf95Q9H693 158 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 SEBOXQ9HB31 216 aaPredicted RBP13.84□□□□□ -0.19
BRCC3-202ENST00000340647 FAM118AQ9NWS6 357 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 SF3B6Q9Y3B4 125 aaKnown RBP13.84□□□□□ -0.19
BRCC3-202ENST00000340647 RNF114Q9Y508 228 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 GMPPBQ9Y5P6 360 aa13.84□□□□□ -0.19
BRCC3-202ENST00000340647 LOC100130705A0A1B0GUX0 176 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 FAM90A8PA6NJQ4 464 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 J3QLW9 94 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 WBP4O75554 376 aaKnown RBP13.83□□□□□ -0.2
BRCC3-202ENST00000340647 GATBO75879 557 aaKnown RBP13.83□□□□□ -0.2
BRCC3-202ENST00000340647 ZNF19P17023 458 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 AZGP1P25311 298 aaKnown RBP13.83□□□□□ -0.2
BRCC3-202ENST00000340647 DUSP1P28562 367 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 ACTC1P68032 377 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 ACTA1P68133 377 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 ALKBH1Q13686 389 aaKnown RBP13.83□□□□□ -0.2
BRCC3-202ENST00000340647 BLMHQ13867 455 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 GALEQ14376 348 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 PDLIM3Q53GG5 364 aaPredicted RBP13.83□□□□□ -0.2
BRCC3-202ENST00000340647 ASPHD2Q6ICH7 369 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 TREML4Q6UXN2 200 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 FAM220AQ7Z4H9 259 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 LHFPL4Q7Z7J7 247 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 PP6455Q8WZ26 134 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 BORCS8Q96FH0 119 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 SPACA5Q96QH8 159 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 ADI1Q9BV57 179 aa13.83□□□□□ -0.2
BRCC3-202ENST00000340647 MRPS18AQ9NVS2 196 aaKnown RBP13.83□□□□□ -0.2
BRCC3-202ENST00000340647 H3BUX3 64 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 CHRM2P08172 466 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 RBP2P50120 134 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 SMN1Q16637 294 aaKnown RBP13.82□□□□□ -0.2
BRCC3-202ENST00000340647 SLC35E4Q6ICL7 350 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 ZNF782Q6ZMW2 699 aaPredicted RBP13.82□□□□□ -0.2
BRCC3-202ENST00000340647 GDPGP1Q6ZNW5 385 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 EGFL6Q8IUX8 553 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 OR8H2Q8N162 312 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 TPRX1Q8N7U7 411 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 OR52I1Q8NGK6 324 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 RFT1Q96AA3 541 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 SSX3Q99909 188 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 C9orf16Q9BUW7 83 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 ALG8Q9BVK2 526 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 ERVK13-1Q9NX77 482 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 CAB39Q9Y376 341 aaPredicted RBP13.82□□□□□ -0.2
BRCC3-202ENST00000340647 ORC6Q9Y5N6 252 aa13.82□□□□□ -0.2
BRCC3-202ENST00000340647 TRBV2A0A0J9YWF9 115 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 ODF3BA8MYP8 253 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 CHST1O43916 411 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 ZFPL1O95159 310 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 HAND1O96004 215 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 HTR1AP08908 422 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 LIMS3P0CW19 117 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 LIMS4P0CW20 117 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms