RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 POC1AQ8NBT0 407 aa11.21□□□□□ -0.61
DNMT3A-202ENST00000321117 RNF126Q9BV68 326 aa11.21□□□□□ -0.61
DNMT3A-202ENST00000321117 SLC2A9Q9NRM0 540 aa11.21□□□□□ -0.61
DNMT3A-202ENST00000321117 HOXC12P31275 282 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 LSM6P62312 80 aaKnown RBP11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 POLR2GP62487 172 aaKnown RBP eCLIP11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 MRPL41Q8IXM3 137 aaKnown RBP11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 HIST1H2BAQ96A08 127 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 VWCEQ96DN2 955 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF106Q9H2Y7 1883 aaKnown RBP11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 CCDC187A0A096LP49 1063 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 PIAS2O75928 621 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 F10P00742 488 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 IGHV3-9P01782 118 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 IGHMP01871 453 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 HLA-HP01893 362 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 PTGER4P35408 488 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 ELLP55199 621 aaPredicted RBP11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 B2MP61769 119 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 FNDC7Q5VTL7 733 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF787Q6DD87 383 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 INTS12Q96CB8 462 aaKnown RBP11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 LURAP1Q96LR2 239 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 LHFPL6Q9Y693 200 aa11.21□□□□□ -0.62
DNMT3A-202ENST00000321117 FUT6P51993 359 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 FAM209BQ5JX69 171 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 FAM166AQ6J272 317 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 YRDCQ86U90 279 aaKnown RBP11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 UBAC2Q8NBM4 344 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 ALKBH3Q96Q83 286 aaPredicted RBP11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 FAM117AQ9C073 453 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 OR14J1Q9UGF5 321 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 NOTCH4Q99466 2003 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 KNTC1P50748 2209 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 DENND4CQ5VZ89 1909 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 C3orf85A0A1B0GTC6 90 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 H0YIZ8 118 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 PDCD6O75340 191 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 CLDN1O95832 211 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 C9orf152Q5JTZ5 239 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 OR1F12Q8NHA8 337 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 CHST5Q9GZS9 411 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 LIPGQ9Y5X9 500 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 MED12Q93074 2177 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 F8VVB4 439 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 F8VWA3 439 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 H3BMH7 237 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 TGOLN2O43493 480 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF708P17019 499 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 PLAC9Q5JTB6 97 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 EXTL1Q92935 676 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 UCK1Q9HA47 277 aa11.2□□□□□ -0.62
DNMT3A-202ENST00000321117 PRR19A6NJB7 356 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF705FA8MVS1 300 aaPredicted RBP11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 ADAM20O43506 726 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF705DP0CH99 300 aaPredicted RBP11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF705BP0CI00 300 aaPredicted RBP11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 MRPL49Q13405 166 aaKnown RBP11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 BHLHE23Q8NDY6 225 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 OR10J5Q8NHC4 309 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 NAT6Q93015 286 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 MTCH2Q9Y6C9 303 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 IGKV1D-43A0A0B4J1Z2 117 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 PPP5D1E7EU14 171 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 H7BYZ3 331 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 PGA3P0DJD8 388 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 NHLH2Q02577 135 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 RAB35Q15286 201 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 MSMO1Q15800 293 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 SYT13Q7L8C5 426 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 CARFQ8N187 725 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 OR4A4PQ8NGN8 299 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 TRAPPC2LQ9UL33 140 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 NOSIPQ9Y314 301 aaKnown RBP11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF816-ZNF321PA0A0X1KG74 233 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 APLNRP35414 380 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 EWSR1Q01844 656 aaKnown RBP eCLIP11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 OR8G2PQ6IF36 304 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 GNRHR2Q96P88 292 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 RTN4RQ9BZR6 473 aa11.19□□□□□ -0.62
DNMT3A-202ENST00000321117 TNFSF11O14788 317 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 DUSP3P51452 185 aaPredicted RBP11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF774Q6NX45 483 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 RDH5Q92781 318 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 LHX4Q969G2 390 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 SMIM8Q96KF7 97 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 OPA3Q9H6K4 179 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 CRLF2Q9HC73 371 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 RNF150Q9ULK6 438 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 RP1L1Q8IWN7 2480 aaPredicted RBP11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 A0A0U1RQK1 487 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 SCAF4O95104 1147 aaKnown RBP11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 FABP4P15090 132 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 PSMB3P49720 205 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 MNX1P50219 401 aaPredicted RBP11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 LBX1P52954 281 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 H3F3AP84243 136 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 D2HGDHQ8N465 521 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 PAQR4Q8N4S7 273 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms