RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 DCAF10Q5QP82 559 aa10.01□□□□□ -0.81
PTPN2-201ENST00000309660 LHFPL2Q6ZUX7 228 aa10.01□□□□□ -0.81
PTPN2-201ENST00000309660 NMES1Q9C002 83 aa10.01□□□□□ -0.81
PTPN2-201ENST00000309660 PARPBPQ9NWS1 579 aa10.01□□□□□ -0.81
PTPN2-201ENST00000309660 IGHV3-64DA0A0J9YX35 117 aa10.01□□□□□ -0.81
PTPN2-201ENST00000309660 CYTIPO60759 359 aa10.01□□□□□ -0.81
PTPN2-201ENST00000309660 HOXD11P31277 338 aaPredicted RBP10.01□□□□□ -0.81
PTPN2-201ENST00000309660 ALDH3B1P43353 468 aa10.01□□□□□ -0.81
PTPN2-201ENST00000309660 PPIAP62937 165 aaKnown RBP10.01□□□□□ -0.81
PTPN2-201ENST00000309660 GLRX5Q86SX6 157 aa10.01□□□□□ -0.81
PTPN2-201ENST00000309660 ZNF100Q8IYN0 542 aa10.01□□□□□ -0.81
PTPN2-201ENST00000309660 MARS2Q96GW9 593 aaKnown RBP10.01□□□□□ -0.81
PTPN2-201ENST00000309660 TTTY12Q9BZ98 90 aa10.01□□□□□ -0.81
PTPN2-201ENST00000309660 DEFB127Q9H1M4 99 aa10.01□□□□□ -0.81
PTPN2-201ENST00000309660 LIME1Q9H400 295 aa10.01□□□□□ -0.81
PTPN2-201ENST00000309660 ASPMQ8IZT6 3477 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 TNRC6BQ9UPQ9 1833 aaKnown RBP10□□□□□ -0.81
PTPN2-201ENST00000309660 A8MXK9 166 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 FBXO24O75426 580 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 TNFSF15O95150 251 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 HAAOP46952 286 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 GPM6AP51674 278 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 PDZK1IP1Q13113 114 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 MRPL21Q7Z2W9 205 aaKnown RBP10□□□□□ -0.81
PTPN2-201ENST00000309660 BAP18Q8IXM2 172 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 MRPS24Q96EL2 167 aaKnown RBP10□□□□□ -0.81
PTPN2-201ENST00000309660 PIK3IP1Q96FE7 263 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 C2orf50Q96LR7 162 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 TMEM231Q9H6L2 316 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 LDAHQ9H6V9 325 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 ZNF703Q9H7S9 590 aaPredicted RBP10□□□□□ -0.81
PTPN2-201ENST00000309660 ANAPC10Q9UM13 185 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 PCNX2A6NKB5 2137 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 ZNF816-ZNF321PA0A0X1KG74 233 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 hCG_38984A0A1B0GV85 526 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 FOXI3A8MTJ6 420 aaPredicted RBP10□□□□□ -0.81
PTPN2-201ENST00000309660 FCGR3AP08637 254 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 ZNF728P0DKX0 622 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 SRSF4Q08170 494 aaKnown RBP10□□□□□ -0.81
PTPN2-201ENST00000309660 MALLQ13021 153 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 ATRAIDQ6UW56 229 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 MEX3BQ6ZN04 569 aaKnown RBP10□□□□□ -0.81
PTPN2-201ENST00000309660 WNT2BQ93097 391 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 SLAMF9Q96A28 289 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 MRPL24Q96A35 216 aaKnown RBP10□□□□□ -0.81
PTPN2-201ENST00000309660 C10orf35Q96D05 121 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 PARP12Q9H0J9 701 aaKnown RBP10□□□□□ -0.81
PTPN2-201ENST00000309660 BCO1Q9HAY6 547 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 C1orf123Q9NWV4 160 aa10□□□□□ -0.81
PTPN2-201ENST00000309660 MSTNO14793 375 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 AGPAT2O15120 278 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 DIRAS3O95661 229 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 IFNA21P01568 189 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 HOXD4P09016 255 aaPredicted RBP9.99□□□□□ -0.81
PTPN2-201ENST00000309660 TGIF1Q15583 401 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 HSD17B13Q7Z5P4 300 aaPredicted RBP9.99□□□□□ -0.81
PTPN2-201ENST00000309660 TMEM251Q8N6I4 163 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 BPIFCQ8NFQ6 507 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 NECAP2Q9NVZ3 263 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 SLC33A1O00400 549 aaPredicted RBP9.99□□□□□ -0.81
PTPN2-201ENST00000309660 BET1O15155 118 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 NGFP01138 241 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 SP9P0CG40 484 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 M6PRP20645 277 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 FUT6P51993 359 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 RBM39Q14498 530 aaKnown RBP9.99□□□□□ -0.81
PTPN2-201ENST00000309660 OR11L1Q8NGX0 322 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 RTN4IP1Q8WWV3 396 aaPredicted RBP9.99□□□□□ -0.81
PTPN2-201ENST00000309660 GPHA2Q96T91 129 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 ZPBPQ9BS86 351 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 HRH4Q9H3N8 390 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 MEMO1Q9Y316 297 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 ZNF705EA8MWA4 302 aaPredicted RBP9.99□□□□□ -0.81
PTPN2-201ENST00000309660 MT-CO3P00414 261 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 OR5AC1P0C628 307 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 RPS2P15880 293 aaKnown RBP9.99□□□□□ -0.81
PTPN2-201ENST00000309660 RCC1P18754 421 aaPredicted RBP9.99□□□□□ -0.81
PTPN2-201ENST00000309660 CHATP28329 748 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 LHX2P50458 406 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 SMCO1Q147U7 214 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 IGFBP7Q16270 282 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 SPIN3Q5JUX0 258 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 RIPPLY2Q5TAB7 128 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 OR2A2Q6IF42 318 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 PRSS54Q6PEW0 395 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 TMPRSS7Q7RTY8 843 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 APH1AQ96BI3 265 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 CRIM1Q9NZV1 1036 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 IL36RNQ9UBH0 155 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 KCNIP3Q9Y2W7 256 aa9.99□□□□□ -0.81
PTPN2-201ENST00000309660 ZNF503-AS2A6NEH8 195 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 M0R296 226 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 XRCC2O43543 280 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 NOVA1P51513 510 aaKnown RBP9.98□□□□□ -0.81
PTPN2-201ENST00000309660 RAB1AP62820 205 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 PLEKHN1Q494U1 663 aaPredicted RBP9.98□□□□□ -0.81
PTPN2-201ENST00000309660 SPATA46Q5T0L3 261 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 RTL6Q6ICC9 239 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 H3F3CQ6NXT2 135 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 GVINP1Q7Z2Y8 2422 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms