RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 PLAC9Q5JTB6 97 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 PTCRAQ6ISU1 281 aaPredicted RBP13.87□□□□□ -0.19
USP43-201ENST00000285199 WFIKKN1Q96NZ8 548 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 SH3BGRL3Q9H299 93 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 GSN-AS1Q9NRJ2 163 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 RPH3ALQ9UNE2 315 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 TMEM127O75204 238 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 GABRA4P48169 554 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 OSR2Q8N2R0 312 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 DMBX1Q8NFW5 382 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 OR1N1Q8NGS0 311 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 PECRQ9BY49 303 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 REG4Q9BYZ8 158 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 MCTS1Q9ULC4 181 aaKnown RBP13.87□□□□□ -0.19
USP43-201ENST00000285199 NPTNQ9Y639 398 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 PLXNB2O15031 1838 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 SCN10AQ9Y5Y9 1956 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 UBE2L5PA0A1B0GUS4 154 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 SIRPB1O00241 398 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 P2RY4P51582 365 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 EDDM3AQ14507 147 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 LY6G6FQ5SQ64 297 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 SPATA46Q5T0L3 261 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 CYB561D1Q8N8Q1 229 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 C5orf66Q9H5L9 145 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 C12orf49Q9H741 205 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 C8orf33Q9H7E9 229 aaPredicted RBP13.87□□□□□ -0.19
USP43-201ENST00000285199 ABI3Q9P2A4 366 aa13.87□□□□□ -0.19
USP43-201ENST00000285199 ASAH2BP0C7U1 165 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 MGST1P10620 155 aaKnown RBP13.86□□□□□ -0.19
USP43-201ENST00000285199 SRPXP78539 464 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 ZNF774Q6NX45 483 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 OR13G1Q8NGZ3 307 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 PTPMT1Q8WUK0 201 aaPredicted RBP13.86□□□□□ -0.19
USP43-201ENST00000285199 IL22RA2Q969J5 263 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 OBP2BQ9NPH6 170 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 HS3ST3A1Q9Y663 406 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 CLDN34H7C241 214 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 TNFSF11O14788 317 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 ZNF217O75362 1048 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 PNLIPRP3Q17RR3 467 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP43-201ENST00000285199 ST8SIA1Q92185 356 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 NAA60Q9H7X0 242 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 P4HTMQ9NXG6 502 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 ANXA10Q9UJ72 324 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 CASP8AP2Q9UKL3 1982 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 MDFIC2A0A1B0GVS7 189 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 XKRY2A2RUG3 117 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 ZNF468Q5VIY5 522 aaPredicted RBP13.86□□□□□ -0.19
USP43-201ENST00000285199 PACRGQ96M98 296 aaPredicted RBP13.86□□□□□ -0.19
USP43-201ENST00000285199 PLEKHF2Q9H8W4 249 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 SLC25A22Q9H936 323 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 PSENENQ9NZ42 101 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 A0A1B0GV90 55 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 NKX2-6A6NCS4 301 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 APLNRP35414 380 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 ECI1P42126 302 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 DYNLT3P51808 116 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 PIGYQ3MUY2 71 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 SYT13Q7L8C5 426 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 ZNF439Q8NDP4 499 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 OR1L3Q8NH93 324 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 LPAR5Q9H1C0 372 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 HEYLQ9NQ87 328 aaPredicted RBP13.86□□□□□ -0.19
USP43-201ENST00000285199 LHX6Q9UPM6 363 aa13.86□□□□□ -0.19
USP43-201ENST00000285199 NOSIPQ9Y314 301 aaKnown RBP13.86□□□□□ -0.19
USP43-201ENST00000285199 CXorf51AA0A1B0GTR3 108 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 C5orf49A4QMS7 147 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 NOXO1Q8NFA2 376 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 SLC39A7Q92504 469 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 EXTL1Q92935 676 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 SLC26A1Q9H2B4 701 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 YKT6O15498 198 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 CHST1O43916 411 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 NXPH2O95156 264 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 RNF224P0DH78 156 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 ATP6V0CP27449 155 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 UBE2NP61088 152 aaKnown RBP13.85□□□□□ -0.19
USP43-201ENST00000285199 EGR4Q05215 589 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 CDCP2Q5VXM1 449 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 ERGIC1Q969X5 290 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 OXGR1Q96P68 337 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 MOB1AQ9H8S9 216 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 SLC2A9Q9NRM0 540 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 TRBV5-7A0A0A0MS05 114 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 TERTO14746 1132 aaKnown RBP13.85□□□□□ -0.19
USP43-201ENST00000285199 BGLAPP02818 100 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 POU2F2P09086 479 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 ACAA1P09110 424 aaPredicted RBP13.85□□□□□ -0.19
USP43-201ENST00000285199 NOVA1P51513 510 aaKnown RBP13.85□□□□□ -0.19
USP43-201ENST00000285199 FZD2Q14332 565 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 ACER2Q5QJU3 275 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 C9orf50Q5SZB4 431 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.85□□□□□ -0.19
USP43-201ENST00000285199 HLA-CQ95604 372 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 DOK5Q9P104 306 aa13.85□□□□□ -0.19
USP43-201ENST00000285199 ERRFI1Q9UJM3 462 aaPredicted RBP13.85□□□□□ -0.19
USP43-201ENST00000285199 BRCA1P38398 1863 aaKnown RBP13.85□□□□□ -0.19
USP43-201ENST00000285199 TGOLN2O43493 480 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms