RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 HLA-DRB3P79483 266 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 TMEM267Q0VDI3 215 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 OR2AE1Q8NHA4 323 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 SGCZQ96LD1 299 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 LILRB3O75022 631 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 FAM3AP98173 230 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 ELOBQ15370 118 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 LINC00114Q6XXX2 140 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 SLC38A9Q8NBW4 561 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 LFNGQ8NES3 379 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 IL1F10Q8WWZ1 152 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 SMIM7Q9BQ49 75 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 RPP25Q9BUL9 199 aaKnown RBP14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 G6PC2Q9NQR9 355 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 WNT16Q9UBV4 365 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 POMT1Q9Y6A1 747 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 FIGNL2A6NMB9 653 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 HSD17B6O14756 317 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 EDN3P14138 238 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 GABREP78334 506 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 SPEM2Q0P670 501 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 CLN3Q13286 438 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 ZNF266Q14584 549 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 GPR137CQ8N3F9 429 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 SLC39A7Q92504 469 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 ZNF665Q9H7R5 613 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 MYOZ1Q9NP98 299 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 FUT9Q9Y231 359 aa14.01□□□□□ -0.17
PRPF40B-201ENST00000261897 IGLV1-36A0A0B4J1U3 117 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 TRAV34A0A0B4J273 112 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 ZNF816-ZNF321PA0A0X1KG74 233 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 A0A1W2PNV4 684 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 CLDN34H7C241 214 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 CTHP32929 405 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 P2RY1P47900 373 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 TMEM176BQ3YBM2 270 aaPredicted RBP14□□□□□ -0.17
PRPF40B-201ENST00000261897 HIST3H2BBQ8N257 126 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 OR2C3Q8N628 320 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 OR8B12Q8NGG6 310 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 C8orf44Q96CB5 159 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 MUCL1Q96DR8 90 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 THAP10Q9P2Z0 257 aaPredicted RBP14□□□□□ -0.17
PRPF40B-201ENST00000261897 STRAPQ9Y3F4 350 aaKnown RBP14□□□□□ -0.17
PRPF40B-201ENST00000261897 DNAJC13O75165 2243 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 NKX2-6A6NCS4 301 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 HLA-GP17693 338 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 POLR2HP52434 150 aaKnown RBP14□□□□□ -0.17
PRPF40B-201ENST00000261897 EWSR1Q01844 656 aaKnown RBP eCLIP14□□□□□ -0.17
PRPF40B-201ENST00000261897 C1orf100Q5SVJ3 147 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 LANCL3Q6ZV70 420 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 ICE1Q9Y2F5 2266 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 VSTM2BA6NLU5 285 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 H7BYZ3 331 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 DYNLT3P51808 116 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 SPCS3P61009 180 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 FAM166AQ6J272 317 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 OR13H1Q8NG92 308 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 CTHRC1Q96CG8 243 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 LMAN1LQ9HAT1 526 aa14□□□□□ -0.17
PRPF40B-201ENST00000261897 MELTFP08582 738 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 SEC11BP0C7V7 166 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 ZNF43P17038 809 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 GPR3P46089 330 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 ARF1P84077 181 aaKnown RBP13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 MFAP5Q13361 173 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 TICRRQ7Z2Z1 1910 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 C5orf24Q7Z6I8 188 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 NAT6Q93015 286 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 TAAR9Q96RI9 348 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 HIST1H2BLQ99880 126 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 ZNF106Q9H2Y7 1883 aaKnown RBP13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 STARD10Q9Y365 291 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 G3V3Y1 287 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 TNFP01375 233 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 MYOGP15173 224 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 DAP3P51398 398 aaKnown RBP13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 GFERP55789 205 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 CARD18P57730 90 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 SLC10A1Q14973 349 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 CXorf66Q5JRM2 361 aaPredicted RBP13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 FAM69BQ5VUD6 431 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 ZNF787Q6DD87 383 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 OR8G2PQ6IF36 304 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 LRRC75AQ8NAA5 344 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 SDSLQ96GA7 329 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 GPX7Q96SL4 187 aaPredicted RBP13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 CALHM2Q9HA72 323 aa13.99□□□□□ -0.17
PRPF40B-201ENST00000261897 LCATP04180 440 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 CSRP1P21291 193 aaKnown RBP13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 FCARP24071 287 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 SLC6A8P48029 635 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 TLE4Q04727 773 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 NOGQ13253 232 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 TEX30Q5JUR7 227 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 AADACL3Q5VUY0 350 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 DNM1P46Q6ZS02 220 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 RBMXL1Q96E39 390 aaKnown RBP13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 RSG1Q9BU20 258 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 PECRQ9BY49 303 aa13.98□□□□□ -0.17
PRPF40B-201ENST00000261897 KLF15Q9UIH9 416 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms