RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 BPNT1O95861 308 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 PLATP00750 562 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 IL1AP01583 271 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 USF1P22415 310 aaPredicted RBP11.79□□□□□ -0.52
VPS25-201ENST00000253794 HTR2CP28335 458 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 SDC2P34741 201 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 CAPZA1P52907 286 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 FGF12P61328 243 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 LMO4P61968 165 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 DGUOKQ16854 277 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 SPIN3Q5JUX0 258 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 FAM58AQ8N1B3 248 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 RAB2BQ8WUD1 216 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 MRPS24Q96EL2 167 aaKnown RBP11.79□□□□□ -0.52
VPS25-201ENST00000253794 SDSLQ96GA7 329 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 POM121Q96HA1 1249 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 METTL9Q9H1A3 318 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 PATZ1Q9HBE1 687 aaKnown RBP11.79□□□□□ -0.52
VPS25-201ENST00000253794 PCDHB16Q9NRJ7 776 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 RBFOX1Q9NWB1 397 aaKnown RBP11.79□□□□□ -0.52
VPS25-201ENST00000253794 FBLN5Q9UBX5 448 aa11.79□□□□□ -0.52
VPS25-201ENST00000253794 FLNAP21333 2647 aaKnown RBP11.78□□□□□ -0.52
VPS25-201ENST00000253794 IGKV1D-17A0A075B6S4 117 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 OR2AT4A6NND4 320 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 CEACAM18A8MTB9 384 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 CDRT1O95170 752 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 ZNF205O95201 554 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 IGHV2-5P01817 119 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 PSG2P11465 335 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 AMY2BP19961 511 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 OR10A3P58181 314 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 NCS1P62166 190 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 QRFPP83859 136 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 IL13RA2Q14627 380 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 RSU1Q15404 277 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 AWAT2Q6E213 333 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 SFRP4Q6FHJ7 346 aaPredicted RBP11.78□□□□□ -0.52
VPS25-201ENST00000253794 GLIPR1L1Q6UWM5 242 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 ZNF788Q6ZQV5 615 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 CLVS1Q8IUQ0 354 aaPredicted RBP11.78□□□□□ -0.52
VPS25-201ENST00000253794 CROCCP3Q8IVE0 287 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 CLDND2Q8NHS1 167 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 EMG1Q92979 244 aaKnown RBP11.78□□□□□ -0.52
VPS25-201ENST00000253794 SEH1LQ96EE3 360 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 S100A13Q99584 98 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 NKX3-1Q99801 234 aaPredicted RBP11.78□□□□□ -0.52
VPS25-201ENST00000253794 FAM192AQ9GZU8 254 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 RBM38Q9H0Z9 239 aaKnown RBP11.78□□□□□ -0.52
VPS25-201ENST00000253794 DNAJB11Q9UBS4 358 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 MIOXQ9UGB7 285 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 STEAP1Q9UHE8 339 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 ITGB1BP2Q9UKP3 347 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 CELSR1Q9NYQ6 3014 aa11.78□□□□□ -0.52
VPS25-201ENST00000253794 TMEM14DPA8MWL7 114 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 LDLRAD4O15165 306 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 WNT2P09544 360 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 TGFBR1P36897 503 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 SCAND1P57086 179 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 VBP1P61758 197 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 RAB11BQ15907 218 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 SFXN4Q6P4A7 337 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 FIP1L1Q6UN15 594 aaKnown RBP11.77□□□□□ -0.53
VPS25-201ENST00000253794 OR2W3Q7Z3T1 314 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 LINC00596Q86U02 117 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 BOLLQ8N9W6 283 aaKnown RBP11.77□□□□□ -0.53
VPS25-201ENST00000253794 C19orf18Q8NEA5 215 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 DEFB108BQ8NET1 73 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 COX4I2Q96KJ9 171 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 GAL3ST1Q99999 423 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 ZNF665Q9H7R5 613 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 IFT22Q9H7X7 185 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 PLGRKTQ9HBL7 147 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 CEPT1Q9Y6K0 416 aa11.77□□□□□ -0.53
VPS25-201ENST00000253794 IGHV3OR15-7A0A075B7D8 119 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 ISPDA4D126 451 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A10PA6NDY2 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A18PA6NE21 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A16PA6NEW6 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A20PA6NIJ5 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A8PA6NJQ4 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A7PA6NKC0 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A22PA8MWA6 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A12PA8MX19 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A5PA8MXJ8 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 A8MXK9 166 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A23PA8MXZ1 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 RNF223E7ERA6 249 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 ZNF701M0R085 212 aaPredicted RBP11.76□□□□□ -0.53
VPS25-201ENST00000253794 SIGLEC5O15389 551 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 GYPAP02724 150 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 CLEC2LP0C7M8 214 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A15PP0C7V4 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A13PP0C7W8 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A14PP0C7W9 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 FAM90A24PP0C7X0 464 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 VSIG8P0DPA2 414 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 GTF2F2P13984 249 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 PRKACAP17612 351 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 LMO1P25800 156 aa11.76□□□□□ -0.53
VPS25-201ENST00000253794 RPS19P39019 145 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms