RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ZNF2Q9BSG1 426 aaPredicted RBP16.17■□□□□ 0.18
PDLIM4-201ENST00000253754 GPR160Q9UJ42 338 aa16.17■□□□□ 0.18
PDLIM4-201ENST00000253754 LIPGQ9Y5X9 500 aa16.17■□□□□ 0.18
PDLIM4-201ENST00000253754 KCNMB2Q9Y691 235 aa16.17■□□□□ 0.18
PDLIM4-201ENST00000253754 LINC01387J3KSC0 135 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 BCL2L11O43521 198 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 PSMB6P28072 239 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 MEOX1P50221 254 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 ARG2P78540 354 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 ACOT7LQ6ZUV0 252 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 CALHM1Q8IU99 346 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 MDS2Q8NDY4 140 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 DHRS9Q9BPW9 319 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 ZNF471Q9BX82 626 aaPredicted RBP16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 C1QTNF5Q9BXJ0 243 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 LIME1Q9H400 295 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 APC2O95996 2303 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 ZNF850A8MQ14 1090 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 SYNGR4O95473 234 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 PGAM2P15259 253 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 UBA52P62987 128 aaKnown RBP16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 OR10AD1Q8NGE0 317 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 LINC00052Q96N35 136 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 PRRG4Q9BZD6 226 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 RGCCQ9H4X1 137 aa16.16■□□□□ 0.18
PDLIM4-201ENST00000253754 ZNF816-ZNF321PA0A0X1KG74 233 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 H0YIZ8 118 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 CA11O75493 328 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 CHATP28329 748 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 PDZK1IP1Q13113 114 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 ARL6IP1Q15041 203 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 ZNF100Q8IYN0 542 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 SLC38A6Q8IZM9 456 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 FDCSPQ8NFU4 85 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 OR10C1Q96KK4 312 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 ANXA10Q9UJ72 324 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 ZNF391Q9UJN7 358 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 KLF13Q9Y2Y9 288 aaPredicted RBP16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 DSPP15924 2871 aaKnown RBP16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 C5orf49A4QMS7 147 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 LGALS8O00214 317 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 NME2P1O60361 137 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 NME2P22392 152 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 PTGER4P35408 488 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 ASCL4Q6XD76 172 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 DCUN1D4Q92564 292 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 CPNE2Q96FN4 548 aaPredicted RBP16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 SCGB3A2Q96PL1 93 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 CMSS1Q9BQ75 279 aaKnown RBP16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 RNF126Q9BV68 326 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 LINC00470Q9BZP3 86 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 COQ3Q9NZJ6 369 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 SLC7A11Q9UPY5 501 aa16.15■□□□□ 0.18
PDLIM4-201ENST00000253754 ZSCAN5BA6NJL1 495 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 CD46P15529 392 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 FUT6P51993 359 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 PPIAP62937 165 aaKnown RBP16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 DEFB109BQ30KR1 87 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 UNQ6126/PRO20091Q6UXV3 157 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 NUFIP2Q7Z417 695 aaKnown RBP16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 PDZD9Q8IXQ8 264 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 OSR2Q8N2R0 312 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 INO80EQ8NBZ0 244 aaPredicted RBP16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 OR51F2Q8NH61 342 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 SPSB4Q96A44 273 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 RRNAD1Q96FB5 475 aaKnown RBP16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 NMES1Q9C002 83 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 PRDM14Q9GZV8 571 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 ACKR4Q9NPB9 350 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 ST3GAL6Q9Y274 331 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 KLRC4-KLRK1H3BQV0 150 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 XRCC2O43543 280 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 FCGR3AP08637 254 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 CD79AP11912 226 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 NPBWR2P48146 333 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 PPA1Q15181 289 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 RTL6Q6ICC9 239 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 OR56B2PQ8NGI1 322 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 MARS2Q96GW9 593 aaKnown RBP16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 RAB18Q9NP72 206 aa16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 ZNF629Q9UEG4 869 aaPredicted RBP16.14■□□□□ 0.17
PDLIM4-201ENST00000253754 ACACAQ13085 2346 aa16.13■□□□□ 0.17
PDLIM4-201ENST00000253754 HOXB5P09067 269 aa16.13■□□□□ 0.17
PDLIM4-201ENST00000253754 NRN1LQ496H8 165 aa16.13■□□□□ 0.17
PDLIM4-201ENST00000253754 COLCA1Q6ZS62 124 aa16.13■□□□□ 0.17
PDLIM4-201ENST00000253754 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.13■□□□□ 0.17
PDLIM4-201ENST00000253754 APH1AQ96BI3 265 aa16.13■□□□□ 0.17
PDLIM4-201ENST00000253754 FGF23Q9GZV9 251 aaPredicted RBP16.13■□□□□ 0.17
PDLIM4-201ENST00000253754 METTL8Q9H825 291 aaKnown RBP16.13■□□□□ 0.17
PDLIM4-201ENST00000253754 PARPBPQ9NWS1 579 aa16.13■□□□□ 0.17
PDLIM4-201ENST00000253754 PFDN2Q9UHV9 154 aa16.13■□□□□ 0.17
PDLIM4-201ENST00000253754 HSF4Q9ULV5 492 aa16.13■□□□□ 0.17
PDLIM4-201ENST00000253754 ZNF891A8MT65 544 aaPredicted RBP16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 F5H0A9 414 aaPredicted RBP16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 OR5H8P0DN80 308 aa16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 DAZAP2Q15038 168 aaPredicted RBP16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 Q6ZPA2 131 aa16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 SLC25A26Q70HW3 274 aa16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 ZNF611Q8N823 705 aa16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 PAPOLGQ9BWT3 736 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms