RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 ZNF486Q96H40 463 aaPredicted RBP15.48■□□□□ 0.07
VIM-201ENST00000224237 TMEM100Q9NV29 134 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 NKIRAS2Q9NYR9 191 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 MTCH1Q9NZJ7 389 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 PLEKHA6Q9Y2H5 1048 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 PRSS44E7EML9 344 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 J3QT63 122 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 PEX14O75381 377 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 NAT1P18440 290 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 CHATP28329 748 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FABP6P51161 128 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 ZFP69Q49AA0 526 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 RNASE10Q5GAN6 216 aaKnown RBP15.48■□□□□ 0.07
VIM-201ENST00000224237 SEZ6L2Q6UXD5 910 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 C22orf34Q6ZV56 151 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 OR10AD1Q8NGE0 317 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 TINAGL1Q9GZM7 467 aaPredicted RBP15.48■□□□□ 0.07
VIM-201ENST00000224237 ITGB1BP2Q9UKP3 347 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.47■□□□□ 0.07
VIM-201ENST00000224237 C7orf66A4D0T2 115 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 TMEM210A6NLX4 147 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 M0QYG6 137 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 ERVH48-1M5A8F1 160 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 SYNGR1O43759 233 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 AMY2AP04746 511 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 GLRXP35754 106 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 OR52W1Q6IF63 320 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 FBXW5Q969U6 566 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 GINS4Q9BRT9 223 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 PLK3Q9H4B4 646 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 RHOFQ9HBH0 211 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 SCP2D1Q9UJQ7 156 aa15.47■□□□□ 0.07
VIM-201ENST00000224237 HEATR1Q9H583 2144 aaKnown RBP15.47■□□□□ 0.07
VIM-201ENST00000224237 DISC1C4P0D8 188 aa15.46■□□□□ 0.07
VIM-201ENST00000224237 PDCD6O75340 191 aa15.46■□□□□ 0.07
VIM-201ENST00000224237 NKX6-1P78426 367 aaPredicted RBP15.46■□□□□ 0.07
VIM-201ENST00000224237 ZMYND11Q15326 602 aa15.46■□□□□ 0.07
VIM-201ENST00000224237 ACTBL2Q562R1 376 aa15.46■□□□□ 0.07
VIM-201ENST00000224237 BPIFB2Q8N4F0 458 aa15.46■□□□□ 0.07
VIM-201ENST00000224237 GIMAP1Q8WWP7 306 aa15.46■□□□□ 0.07
VIM-201ENST00000224237 SNAPC3Q92966 411 aa15.46■□□□□ 0.07
VIM-201ENST00000224237 EMG1Q92979 244 aaKnown RBP15.46■□□□□ 0.07
VIM-201ENST00000224237 FZR1Q9UM11 496 aa15.46■□□□□ 0.07
VIM-201ENST00000224237 OSGIN2Q9Y236 505 aa15.46■□□□□ 0.07
VIM-201ENST00000224237 POLDIP2Q9Y2S7 368 aa15.46■□□□□ 0.07
VIM-201ENST00000224237 SMG1Q96Q15 3661 aaKnown RBP15.46■□□□□ 0.07
VIM-201ENST00000224237 ARPC1BO15143 372 aaKnown RBP15.46■□□□□ 0.06
VIM-201ENST00000224237 PRAF2O60831 178 aa15.46■□□□□ 0.06
VIM-201ENST00000224237 OR7C1O76099 320 aaPredicted RBP15.46■□□□□ 0.06
VIM-201ENST00000224237 CD40P25942 277 aa15.46■□□□□ 0.06
VIM-201ENST00000224237 HRH1P35367 487 aa15.46■□□□□ 0.06
VIM-201ENST00000224237 NKX2-5P52952 324 aaPredicted RBP15.46■□□□□ 0.06
VIM-201ENST00000224237 RPS23P62266 143 aaKnown RBP15.46■□□□□ 0.06
VIM-201ENST00000224237 TMEM108Q6UXF1 575 aa15.46■□□□□ 0.06
VIM-201ENST00000224237 WDR86Q86TI4 376 aa15.46■□□□□ 0.06
VIM-201ENST00000224237 BATF2Q8N1L9 274 aa15.46■□□□□ 0.06
VIM-201ENST00000224237 OR4K15Q8NH41 348 aa15.46■□□□□ 0.06
VIM-201ENST00000224237 PRRT1Q99946 306 aa15.46■□□□□ 0.06
VIM-201ENST00000224237 NPDC1Q9NQX5 325 aaPredicted RBP15.46■□□□□ 0.06
VIM-201ENST00000224237 SLC2A8Q9NY64 477 aa15.46■□□□□ 0.06
VIM-201ENST00000224237 FLVCR2Q9UPI3 526 aa15.46■□□□□ 0.06
VIM-201ENST00000224237 USP24Q9UPU5 2620 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 ESPL1Q14674 2120 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 CADP27708 2225 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 A0A0A6YYJ9 748 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 MLNRO43193 412 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 TPD52L2O43399 206 aaKnown RBP15.45■□□□□ 0.06
VIM-201ENST00000224237 ZNF735P0CB33 412 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 ZNF250P15622 560 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 RRAS2P62070 204 aaPredicted RBP15.45■□□□□ 0.06
VIM-201ENST00000224237 MRPS15P82914 257 aaKnown RBP15.45■□□□□ 0.06
VIM-201ENST00000224237 ZNF154Q13106 437 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 MPV17LQ2QL34 196 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 LINC00596Q86U02 117 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 HOGA1Q86XE5 327 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 TCTE3Q8IZS6 198 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 SPERTQ8NA61 448 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 CYYR1Q96J86 154 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 SLC25A21Q9BQT8 299 aaPredicted RBP15.45■□□□□ 0.06
VIM-201ENST00000224237 FAAP24Q9BTP7 215 aa15.45■□□□□ 0.06
VIM-201ENST00000224237 F8VVB4 439 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 F8VWA3 439 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 H0YL77 283 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 H3BUI4 141 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 ATP6V1G1O75348 118 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 PPP3CBP16298 524 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 FUT3P21217 361 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 PTAFRP25105 342 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 PMELP40967 661 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 ASCL1P50553 236 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 MECP2P51608 486 aaKnown RBP15.44■□□□□ 0.06
VIM-201ENST00000224237 IGFBP7Q16270 282 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 IDO2Q6ZQW0 420 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 Q8IYB0 196 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 SCCPDHQ8NBX0 429 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 OR13G1Q8NGZ3 307 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 RADILQ96JH8 1075 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 FAM210AQ96ND0 272 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 SULT4A1Q9BR01 284 aa15.44■□□□□ 0.06
VIM-201ENST00000224237 GHITMQ9H3K2 345 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms