RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	CALHM1	Q8IU99	346 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	ZNF561	Q8N587	486 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	PARP16	Q8N5Y8	322 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	KIR3DL3	Q8N743	410 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	SPATA3	Q8NHX4	192 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	SEH1L	Q96EE3	360 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	CEP19	Q96LK0	163 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	GAFA1	Q96PS6	74 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	DCTN5	Q9BTE1	182 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	ZCCHC4	Q9H5U6	513 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	HES4	Q9HCC6	221 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	PSORS1C1	Q9UIG5	152 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	ZNF222	Q9UK12	451 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	DHDH	Q9UQ10	334 aa		11.81	□□□□□ -0.52
SDHD-209	ENST00000640554	IGKV1D-17	A0A075B6S4	117 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	TRBV23-1	A0A0A0MS06	115 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	RFPL4A	A6NLU0	287 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554		E9PI62	339 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	RFPL4AL1	F8VTS6	287 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554		H3BSH0	61 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	OGG1	O15527	345 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	TOX4	O94842	621 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	AZGP1	P25311	298 aa	Known RBP	11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	PRDX2	P32119	198 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	HSPA13	P48723	471 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	TAS2R43	P59537	309 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	HILS1	P60008	231 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	FGF12	P61328	243 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	IKZF1	Q13422	519 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	RIPK1	Q13546	671 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	CDK5R1	Q15078	307 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	TUSC1	Q2TAM9	212 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	KLF17	Q5JT82	389 aa	Predicted RBP	11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	GPR157	Q5UAW9	335 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	FIP1L1	Q6UN15	594 aa	Known RBP	11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	STX19	Q8N4C7	294 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	FAM216B	Q8N7L0	139 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	RPS4Y2	Q8TD47	263 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	GPR148	Q8TDV2	347 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	WDFY2	Q96P53	400 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	OPALIN	Q96PE5	141 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	MDFI	Q99750	246 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	FAM234A	Q9H0X4	552 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	SCN3B	Q9NY72	215 aa		11.8	□□□□□ -0.52
SDHD-209	ENST00000640554	IGKV1-9	A0A0C4DH69	117 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554		A0A1W2PPH5	198 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	PLAT	P00750	562 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	CHRM2	P08172	466 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	DGUOK	Q16854	277 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	RNLS	Q5VYX0	342 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	SLC25A26	Q70HW3	274 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	SAXO1	Q8IYX7	474 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	BPIFB6	Q8NFQ5	453 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	OR51A4	Q8NGJ6	313 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	NPRL2	Q8WTW4	380 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	TSEN15	Q8WW01	171 aa	Known RBP	11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	SMIM19	Q96E16	107 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	PDCD1LG2	Q9BQ51	273 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	ZMAT3	Q9HA38	289 aa	Known RBP	11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	MTCH1	Q9NZJ7	389 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	GLS2	Q9UI32	602 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	ERGIC3	Q9Y282	383 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	ZNF281	Q9Y2X9	895 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	MAB21L2	Q9Y586	359 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	SVEP1	Q4LDE5	3571 aa		11.79	□□□□□ -0.52
SDHD-209	ENST00000640554	IGKV1-27	A0A075B6S5	117 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	TRIM77	I1YAP6	450 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554		M0R1W7	72 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	MAGEB3	O15480	346 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	SULT1B1	O43704	296 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	CD1A	P06126	327 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	MMP9	P14780	707 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	NDUFB7	P17568	137 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	GTF2A1	P52655	376 aa	Predicted RBP	11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	ARF6	P62330	175 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	PDZK1IP1	Q13113	114 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	BLMH	Q13867	455 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	C6orf141	Q5SZD1	244 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	OR2G6	Q5TZ20	316 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	TMEM185A	Q8NFB2	350 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	OR5D13	Q8NGL4	314 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	OR13C9	Q8NGT0	318 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	OR10AC1	Q8NH08	325 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	NRG4	Q8WWG1	115 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	GATAD2B	Q8WXI9	593 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	H1FX	Q92522	213 aa	Known RBP	11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	THRSP	Q92748	146 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	MYDGF	Q969H8	173 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	PCGF1	Q9BSM1	259 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	SIRPD	Q9H106	197 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	FKBP14	Q9NWM8	211 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	ZNF69	Q9UC07	566 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	CLEC2D	Q9UHP7	191 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	PCDHGB5	Q9Y5G0	923 aa		11.78	□□□□□ -0.52
SDHD-209	ENST00000640554	WNK2	Q9Y3S1	2297 aa		11.77	□□□□□ -0.52
SDHD-209	ENST00000640554	MYL12B	O14950	172 aa		11.77	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms