RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SDSLQ96GA7 329 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 AKR1E2Q96JD6 320 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 ERMAPQ96PL5 475 aaPredicted RBP10.96□□□□□ -0.65
SNX1-214ENST00000625244 GPX7Q96SL4 187 aaPredicted RBP10.96□□□□□ -0.65
SNX1-214ENST00000625244 TM2D3Q9BRN9 247 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 SP140LQ9H930 580 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 SRA1Q9HD15 236 aaKnown RBP10.96□□□□□ -0.65
SNX1-214ENST00000625244 NRIP3Q9NQ35 241 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 ZFP57Q9NU63 452 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 ENOPH1Q9UHY7 261 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 IER3IP1Q9Y5U9 82 aa10.96□□□□□ -0.65
SNX1-214ENST00000625244 IDH3BO43837 385 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 PGA5P0DJD9 388 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 CRABP1P29762 137 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 OTX1P32242 354 aaPredicted RBP10.95□□□□□ -0.66
SNX1-214ENST00000625244 OR3A4PP47883 348 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 FAM3AP98173 230 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 DYNC1I2Q13409 638 aaKnown RBP10.95□□□□□ -0.66
SNX1-214ENST00000625244 DEFB136Q30KP8 78 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 C9orf152Q5JTZ5 239 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 DRAM2Q6UX65 266 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 CD300LDQ6UXZ3 194 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 SLC16A9Q7RTY1 509 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 ZNF695Q8IW36 515 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 OR5M8Q8NGP6 311 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 OR13D1Q8NGV5 346 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 CAPSLQ8WWF8 208 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 DDB2Q92466 427 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 SPSB4Q96A44 273 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 SLC25A33Q9BSK2 321 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 EGLN3Q9H6Z9 239 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 S100A14Q9HCY8 104 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 BAIAP2Q9UQB8 552 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 RHBDD3Q9Y3P4 386 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 ORC6Q9Y5N6 252 aa10.95□□□□□ -0.66
SNX1-214ENST00000625244 C17orf98A8MV24 154 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 SOX14O95416 240 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 BAG2O95816 211 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 RENP00797 406 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 HCKP08631 526 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 PRKACGP22612 351 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 GLRA1P23415 457 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 RPS27P42677 84 aaKnown RBP10.94□□□□□ -0.66
SNX1-214ENST00000625244 ZNF260Q3ZCT1 412 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 DNM1P34Q6PK57 102 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 TMEM179BQ7Z7N9 219 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 OR2T33Q8NG76 320 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 OR2T27Q8NH04 317 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 NIPSNAP1Q9BPW8 284 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 MICU1Q9BPX6 476 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 PAPOLGQ9BWT3 736 aaKnown RBP10.94□□□□□ -0.66
SNX1-214ENST00000625244 TSSK6Q9BXA6 273 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 OSBPL10Q9BXB5 764 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 FGF23Q9GZV9 251 aaPredicted RBP10.94□□□□□ -0.66
SNX1-214ENST00000625244 OPA3Q9H6K4 179 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 PAPOLBQ9NRJ5 636 aaKnown RBP10.94□□□□□ -0.66
SNX1-214ENST00000625244 KRT84Q9NSB2 600 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 IL20Q9NYY1 176 aa10.94□□□□□ -0.66
SNX1-214ENST00000625244 ANKRD65E5RJM6 399 aa10.93□□□□□ -0.66
SNX1-214ENST00000625244 ARPC3O15145 178 aa10.93□□□□□ -0.66
SNX1-214ENST00000625244 IFNGP01579 166 aa10.93□□□□□ -0.66
SNX1-214ENST00000625244 IGHV1-8P0DP01 117 aa10.93□□□□□ -0.66
SNX1-214ENST00000625244 OSMP13725 252 aa10.93□□□□□ -0.66
SNX1-214ENST00000625244 PRKXP51817 358 aa10.93□□□□□ -0.66
SNX1-214ENST00000625244 SLC36A3Q495N2 470 aa10.93□□□□□ -0.66
SNX1-214ENST00000625244 PLBD1Q6P4A8 553 aa10.93□□□□□ -0.66
SNX1-214ENST00000625244 HS3ST5Q8IZT8 346 aa10.93□□□□□ -0.66
SNX1-214ENST00000625244 NOL4LQ96MY1 436 aaPredicted RBP10.93□□□□□ -0.66
SNX1-214ENST00000625244 RBM14Q96PK6 669 aaKnown RBP10.93□□□□□ -0.66
SNX1-214ENST00000625244 PRRG3Q9BZD7 231 aa10.93□□□□□ -0.66
SNX1-214ENST00000625244 MRPL22Q9NWU5 206 aaKnown RBP10.93□□□□□ -0.66
SNX1-214ENST00000625244 OAZ3Q9UMX2 235 aa10.93□□□□□ -0.66
SNX1-214ENST00000625244 VPS13DQ5THJ4 4388 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 MEX3AA1L020 520 aaKnown RBP10.92□□□□□ -0.66
SNX1-214ENST00000625244 SAC3D1A6NKF1 404 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 RIIAD1A6NNX1 92 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 H3BNX3 289 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 XRCC2O43543 280 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 OR2F2O95006 317 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 TXNDC12O95881 172 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 PIPP12273 146 aaPredicted RBP10.92□□□□□ -0.66
SNX1-214ENST00000625244 MYF6P23409 242 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 DCTDP32321 178 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 FXYD6P3P58550 94 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 KLHL12Q53G59 568 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 FAM76BQ5HYJ3 339 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 MINOS1Q5TGZ0 78 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 THAP5Q7Z6K1 395 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 PQLC1Q8N2U9 271 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 CD177Q8N6Q3 437 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 NDNFQ8TB73 568 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 SGK3Q96BR1 496 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 RTL8AQ9BWD3 113 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 GABARAPL1Q9H0R8 117 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 MINOS1-NBL1R4GNA1 71 aa10.92□□□□□ -0.66
SNX1-214ENST00000625244 PKHD1P08F94 4074 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 hCG_38984A0A1B0GV85 526 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 TMEM210A6NLX4 147 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 HLA-DQA2P01906 255 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 PSKH1P11801 424 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms