RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SFXN4Q6P4A7 337 aa16.69■□□□□ 0.26
PDLIM2-221ENST00000622702 POC1AQ8NBT0 407 aa16.69■□□□□ 0.26
PDLIM2-221ENST00000622702 OR51F2Q8NH61 342 aa16.69■□□□□ 0.26
PDLIM2-221ENST00000622702 CCL17Q92583 94 aa16.69■□□□□ 0.26
PDLIM2-221ENST00000622702 DGCR14Q96DF8 476 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-221ENST00000622702 FAM192AQ9GZU8 254 aa16.69■□□□□ 0.26
PDLIM2-221ENST00000622702 PLGRKTQ9HBL7 147 aa16.69■□□□□ 0.26
PDLIM2-221ENST00000622702 TREM2Q9NZC2 230 aa16.69■□□□□ 0.26
PDLIM2-221ENST00000622702 MTCH1Q9NZJ7 389 aa16.69■□□□□ 0.26
PDLIM2-221ENST00000622702 MRPS28Q9Y2Q9 187 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-221ENST00000622702 IGKV1-12A0A0C4DH73 117 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 SRRM5B3KS81 715 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 TMEM178BH3BS89 294 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 ANGPTL7O43827 346 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 TMEM127O75204 238 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 IGKV1D-12P01611 117 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 RANBP1P43487 201 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 CAV3P56539 151 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 C1QL2Q7Z5L3 287 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 CROCCP3Q8IVE0 287 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 C1orf87Q8N0U7 546 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 GCSAMQ8N6F7 178 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 LRRC29Q8WV35 223 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 SLC25A28Q96A46 364 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 SLC25A46Q96AG3 418 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 NRIP2Q9BQI9 281 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 DCAF16Q9NXF7 216 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 GHRLQ9UBU3 117 aa16.68■□□□□ 0.26
PDLIM2-221ENST00000622702 LYNX1G3V0Z9 82 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 KDM4BO94953 1096 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 LYNX1P0DP58 116 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 ERVK11-1P61568 191 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 RAB11BQ15907 218 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 FOXB2Q5VYV0 432 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 AWAT2Q6E213 333 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 ZNF525Q8N782 197 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 TBC1D15Q8TC07 691 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 SLAMF9Q96A28 289 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 CEP19Q96LK0 163 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 C1orf147Q96MC9 270 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 TMUB1Q9BVT8 246 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 CHODLQ9H9P2 273 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 RHOFQ9HBH0 211 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 SMURF1Q9HCE7 757 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 IL36GQ9NZH8 169 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 STEAP1Q9UHE8 339 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 TRAPPC2LH3BP13 241 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 AKR7A2O43488 359 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 CYB5R3P00387 301 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 UBBP0CG47 229 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 CD99P14209 185 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 HNRNPA0Q13151 305 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 HES5Q5TA89 166 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 GLIPR1L1Q6UWM5 242 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 DNM1P46Q6ZS02 220 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 Q8IYB0 196 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 Q8NFD4 153 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 S100A13Q99584 98 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 METTL9Q9H1A3 318 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 HES4Q9HCC6 221 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 NPTNQ9Y639 398 aa16.67■□□□□ 0.26
PDLIM2-221ENST00000622702 F8P00451 2351 aa16.66■□□□□ 0.26
PDLIM2-221ENST00000622702 ZNF780AO75290 641 aaPredicted RBP16.66■□□□□ 0.26
PDLIM2-221ENST00000622702 EGR1P18146 543 aa16.66■□□□□ 0.26
PDLIM2-221ENST00000622702 NPBWR2P48146 333 aa16.66■□□□□ 0.26
PDLIM2-221ENST00000622702 TMEM33P57088 247 aa16.66■□□□□ 0.26
PDLIM2-221ENST00000622702 CLEC2AQ6UVW9 174 aa16.66■□□□□ 0.26
PDLIM2-221ENST00000622702 ZNF488Q96MN9 340 aa16.66■□□□□ 0.26
PDLIM2-221ENST00000622702 RASL12Q9NYN1 266 aa16.66■□□□□ 0.26
PDLIM2-221ENST00000622702 DAPK2Q9UIK4 370 aa16.66■□□□□ 0.26
PDLIM2-221ENST00000622702 ING4Q9UNL4 249 aa16.66■□□□□ 0.26
PDLIM2-221ENST00000622702 CLDN25C9JDP6 229 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 F8VVB4 439 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 F8VWA3 439 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 FSTL3O95633 263 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 BPNT1O95861 308 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 SFTPBP07988 381 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 CSF3P09919 207 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 SLC2A2P11168 524 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 BCL3P20749 454 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 GLRA1P23415 457 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 RBMXP38159 391 aaKnown RBP16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 CAPZA1P52907 286 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 GPR176Q14439 515 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 RSU1Q15404 277 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 DGUOKQ16854 277 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 ELP2Q6IA86 826 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 DYNC2LI1Q8TCX1 351 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 FAM3DQ96BQ1 224 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 BARHL1Q9BZE3 327 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 ELL3Q9HB65 397 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 PCDHB16Q9NRJ7 776 aa16.65■□□□□ 0.26
PDLIM2-221ENST00000622702 H7C1Q1 480 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 NXPH2O95156 264 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 ARSBP15848 533 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 GIFP27352 417 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 PDLIM4P50479 330 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 RORCP51449 518 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 BMXP51813 675 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms