RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 KLRD1Q13241 179 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 TAF9Q16594 264 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 SLC25A30Q5SVS4 291 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 CCDC121Q6ZUS5 278 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 FAM220AQ7Z4H9 259 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 KCTD20Q7Z5Y7 419 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 C10orf67Q8IYJ2 551 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 BEND2Q8NDZ0 799 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 LINC01006Q8NI28 216 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 RORBQ92753 470 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 ZNF488Q96MN9 340 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 CITED1Q99966 193 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 C16orf95Q9H693 158 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 ELL3Q9HB65 397 aaPredicted RBP15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 IMPAD1Q9NX62 359 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 CLPXO76031 633 aa15.58■□□□□ 0.08
CCDC28A-203ENST00000617445 UBCP0CG48 685 aaKnown RBP15.58■□□□□ 0.08
CCDC28A-203ENST00000617445 AANATQ16613 207 aa15.58■□□□□ 0.08
CCDC28A-203ENST00000617445 DHRS7BQ6IAN0 325 aaPredicted RBP15.58■□□□□ 0.08
CCDC28A-203ENST00000617445 ZFP1Q6P2D0 407 aa15.58■□□□□ 0.08
CCDC28A-203ENST00000617445 PP6455Q8WZ26 134 aa15.58■□□□□ 0.08
CCDC28A-203ENST00000617445 C19orf12Q9NSK7 152 aa15.58■□□□□ 0.08
CCDC28A-203ENST00000617445 USE1Q9NZ43 259 aa15.58■□□□□ 0.08
CCDC28A-203ENST00000617445 FAM230AA0A1W2PPH8 454 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 A0A1W2PRD5 423 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 A0A1W2PRF3 423 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 A0A1W2PRM7 423 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 A6NIN4 97 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 SAC3D1A6NKF1 404 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 SNTNA6NMZ2 147 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 TIMM23O14925 209 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 TSPAN9O75954 239 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 TK1P04183 234 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 ALPLP05186 524 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 ISL1P61371 349 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 ACTC1P68032 377 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 ACTA1P68133 377 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 MEDAGQ5VYS4 303 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 TMEM200BQ69YZ2 307 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 HCP5Q6MZN7 132 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 BRICD5Q6PL45 260 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 ANGPTL5Q86XS5 388 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 HRASLS5Q96KN8 279 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 MYCBPQ99417 103 aaPredicted RBP15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 CHST5Q9GZS9 411 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 MEGF9Q9H1U4 602 aa15.57■□□□□ 0.08
CCDC28A-203ENST00000617445 K7N7A8 449 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 ANGPTL7O43827 346 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 APOL3O95236 402 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 CHRM2P08172 466 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 DLX1P56177 255 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 PROK1P58294 105 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 SNRPGP62308 76 aaKnown RBP15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 PRB3Q04118 309 aaPredicted RBP15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 UBE2V2Q15819 145 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 ODF4Q2M2E3 257 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 TMEM244Q5VVB8 128 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 Q8IYB0 196 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 DNAAF1Q8NEP3 725 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 TRMT10AQ8TBZ6 339 aaKnown RBP15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 PYDC1Q8WXC3 89 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 CEP19Q96LK0 163 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 SEBOXQ9HB31 216 aaPredicted RBP15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 OR14J1Q9UGF5 321 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 GNG8Q9UK08 70 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 MEGF8Q7Z7M0 2845 aa15.56■□□□□ 0.08
CCDC28A-203ENST00000617445 DSCAML1Q8TD84 2053 aa15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 M0QZ24 198 aa15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 ZNF85Q03923 595 aa15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 CNN3Q15417 329 aaKnown RBP15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 FDX2Q6P4F2 183 aa15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 Q6ZSV7 163 aa15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 EGFL6Q8IUX8 553 aa15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 MKXQ8IYA7 352 aa15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 PRSS35Q8N3Z0 413 aa15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 PNKDQ8N490 385 aa15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 C11orf42Q8N5U0 333 aa15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 DTX3Q8N9I9 347 aa15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 BORCS8Q96FH0 119 aa15.55■□□□□ 0.08
CCDC28A-203ENST00000617445 EBAG9O00559 213 aa15.54■□□□□ 0.08
CCDC28A-203ENST00000617445 RBP4P02753 201 aa15.54■□□□□ 0.08
CCDC28A-203ENST00000617445 ISG15P05161 165 aa15.54■□□□□ 0.08
CCDC28A-203ENST00000617445 ALDH3A2P51648 485 aa15.54■□□□□ 0.08
CCDC28A-203ENST00000617445 ERVFRD-1P60508 538 aa15.54■□□□□ 0.08
CCDC28A-203ENST00000617445 ENTHD1Q8IYW4 607 aa15.54■□□□□ 0.08
CCDC28A-203ENST00000617445 OR2G2Q8NGZ5 317 aa15.54■□□□□ 0.08
CCDC28A-203ENST00000617445 MRPL48Q96GC5 212 aaKnown RBP15.54■□□□□ 0.08
CCDC28A-203ENST00000617445 SSX3Q99909 188 aa15.54■□□□□ 0.08
CCDC28A-203ENST00000617445 RAB18Q9NP72 206 aa15.54■□□□□ 0.08
CCDC28A-203ENST00000617445 MTCH1Q9NZJ7 389 aa15.54■□□□□ 0.08
CCDC28A-203ENST00000617445 LOC107986453A0A1B0GWG9 222 aa15.53■□□□□ 0.08
CCDC28A-203ENST00000617445 J3QRE1 110 aa15.53■□□□□ 0.08
CCDC28A-203ENST00000617445 ENTPD6O75354 484 aa15.53■□□□□ 0.08
CCDC28A-203ENST00000617445 CYB5AP00167 134 aa15.53■□□□□ 0.08
CCDC28A-203ENST00000617445 RPSAP08865 295 aaKnown RBP15.53■□□□□ 0.08
CCDC28A-203ENST00000617445 PRKACBP22694 351 aa15.53■□□□□ 0.08
CCDC28A-203ENST00000617445 CEBPDP49716 269 aaPredicted RBP15.53■□□□□ 0.08
CCDC28A-203ENST00000617445 RBP2P50120 134 aa15.53■□□□□ 0.08
CCDC28A-203ENST00000617445 ATP1B3P54709 279 aa15.53■□□□□ 0.08
CCDC28A-203ENST00000617445 LGALS4P56470 323 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms