RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 PRKACBP22694 351 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 FPR2P25090 351 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 AZGP1P25311 298 aaKnown RBP13.83□□□□□ -0.2
SSBP4-213ENST00000602088 GABRA2P47869 451 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 RBP2P50120 134 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 ATP1B3P54709 279 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 AQP4P55087 323 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 MED21Q13503 144 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 TUSC1Q2TAM9 212 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 RPL22L1Q6P5R6 122 aaKnown RBP13.83□□□□□ -0.2
SSBP4-213ENST00000602088 USP43Q70EL4 1123 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 LY6G5BQ8NDX9 201 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 RPS4Y2Q8TD47 263 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 C22orf15Q8WYQ4 148 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 SDSLQ96GA7 329 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 CNTD2Q9H8S5 307 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 CHCHD3Q9NX63 227 aaKnown RBP13.83□□□□□ -0.2
SSBP4-213ENST00000602088 MTCH1Q9NZJ7 389 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 CNOT2Q9NZN8 540 aaKnown RBP13.83□□□□□ -0.2
SSBP4-213ENST00000602088 MAB21L2Q9Y586 359 aa13.83□□□□□ -0.2
SSBP4-213ENST00000602088 RFPL4AA6NLU0 287 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 RFPL4AL1F8VTS6 287 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 H0YHG0 523 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 OGG1O15527 345 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 MT-ND2P03891 347 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 IGHV4-38-2P0DP08 117 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 MMP9P14780 707 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 PRDX2P32119 198 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 MTCP1P56278 107 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 CAV3P56539 151 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 CDK5R1Q15078 307 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 KRTAP24-1Q3LI83 254 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 BATF2Q8N1L9 274 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 PARP16Q8N5Y8 322 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 CD177Q8N6Q3 437 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 ZNF485Q8NCK3 441 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 ZNRF1Q8ND25 227 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 BPIFB6Q8NFQ5 453 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 OR13C9Q8NGT0 318 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 OR52N1Q8NH53 320 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 SPSB1Q96BD6 273 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 DMRTB1Q96MA1 342 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 WDFY2Q96P53 400 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 SLC6A7Q99884 636 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 DCTN5Q9BTE1 182 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 SUCNR1Q9BXA5 334 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 SIRPDQ9H106 197 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 SLC25A10Q9UBX3 287 aaPredicted RBP13.82□□□□□ -0.2
SSBP4-213ENST00000602088 ZNF69Q9UC07 566 aa13.82□□□□□ -0.2
SSBP4-213ENST00000602088 SIRT4Q9Y6E7 314 aaPredicted RBP13.82□□□□□ -0.2
SSBP4-213ENST00000602088 F8VVB4 439 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 F8VWA3 439 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 RGS9O75916 674 aaPredicted RBP13.81□□□□□ -0.2
SSBP4-213ENST00000602088 VENTXO95231 258 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 LALBAP00709 142 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 PLATP00750 562 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 ARF6P62330 175 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 LHFPL2Q6ZUX7 228 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 SLC25A26Q70HW3 274 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 SERPINA12Q8IW75 414 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 BPIFB2Q8N4F0 458 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 OR5D14Q8NGL3 314 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 C8orf46Q8TAG6 207 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 GATAD2BQ8WXI9 593 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 RGP1Q92546 391 aaPredicted RBP13.81□□□□□ -0.2
SSBP4-213ENST00000602088 SLAMF9Q96A28 289 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 CEP19Q96LK0 163 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 PCGF1Q9BSM1 259 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 ZCCHC4Q9H5U6 513 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 FKBP14Q9NWM8 211 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 DHDHQ9UQ10 334 aa13.81□□□□□ -0.2
SSBP4-213ENST00000602088 STAB1Q9NY15 2570 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 IGHV3OR16-10A0A075B7F0 116 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 TRAV40A0A0B4J280 105 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 TOX4O94842 621 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 INMTO95050 263 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 ALX3O95076 343 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 KNG1P01042 644 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 SFTPBP07988 381 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 OCM2P0CE71 109 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 OCMP0CE72 109 aaPredicted RBP13.8□□□□□ -0.2
SSBP4-213ENST00000602088 NDUFB7P17568 137 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 HILS1P60008 231 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 C6orf141Q5SZD1 244 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 METTL11BQ5VVY1 283 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 C9orf139Q6ZV77 190 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 AHSA2Q719I0 299 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 MKXQ8IYA7 352 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 BCL6BQ8N143 479 aaPredicted RBP13.8□□□□□ -0.2
SSBP4-213ENST00000602088 STX19Q8N4C7 294 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 ZNF561Q8N587 486 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 TMEM185AQ8NFB2 350 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 GPR148Q8TDV2 347 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 TSEN15Q8WW01 171 aaKnown RBP13.8□□□□□ -0.2
SSBP4-213ENST00000602088 H1FXQ92522 213 aaKnown RBP13.8□□□□□ -0.2
SSBP4-213ENST00000602088 OPALINQ96PE5 141 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 TBX15Q96SF7 602 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 VCX3BQ9H321 246 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 KPTNQ9Y664 436 aa13.8□□□□□ -0.2
SSBP4-213ENST00000602088 SLC1A7O00341 560 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms