RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 EXOSC1Q9Y3B2 195 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 RNF114Q9Y508 228 aa14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 EFCAB10A6NFE3 127 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 ANKRD61A6NGH8 418 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 GPR137BO60478 399 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 FCN3O75636 299 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 GYPAP02724 150 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 CCDC159P0C7I6 412 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 IER3P46695 156 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 KRTAP10-3P60369 221 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 BTN2A1Q7KYR7 527 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 FAM90A1Q86YD7 464 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 ZNF676Q8N7Q3 588 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 LINC01006Q8NI28 216 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 PP6455Q8WZ26 134 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 LHX4Q969G2 390 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 C12orf43Q96C57 262 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 RASSF4Q9H2L5 321 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 OR51I2Q9H344 312 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 GPR173Q9NS66 373 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 HHLA2Q9UM44 414 aa14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 DIMT1Q9UNQ2 313 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 CAB39Q9Y376 341 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-203ENST00000594298 DVL1O14640 695 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 IGHV4-59P01825 116 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 PIPP12273 146 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 TGM4P49221 684 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 PROK1P58294 105 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 NANOS3P60323 173 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 ASPHD2Q6ICH7 369 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 RDH10Q8IZV5 341 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 NRG4Q8WWG1 115 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 RNF166Q96A37 237 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 DMRTB1Q96MA1 342 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 ZNF649Q9BS31 505 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 COMMD4Q9H0A8 199 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 CNTD2Q9H8S5 307 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 ISG20L2Q9H9L3 353 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 PLCXD1Q9NUJ7 323 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 CNOT2Q9NZN8 540 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 DNAJB11Q9UBS4 358 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 KPTNQ9Y664 436 aa14.44□□□□□ -0.1
SHKBP1-203ENST00000594298 CMYA5Q8N3K9 4069 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 A0A0U1RQK1 487 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 TMEM212A6NML5 194 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 GNAO1P09471 354 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 LIMS3P0CW19 117 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 LIMS4P0CW20 117 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 ZNF20P17024 532 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 FUT6P51993 359 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 ARF6P62330 175 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 RIPK1Q13546 671 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 CNN3Q15417 329 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 CCDC58Q4VC31 144 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 SLC36A1Q7Z2H8 476 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 ZSCAN4Q8NAM6 433 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 FBLIM1Q8WUP2 373 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 GGHQ92820 318 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 CHST5Q9GZS9 411 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 FGF23Q9GZV9 251 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 DPAGT1Q9H3H5 408 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 NEK6Q9HC98 313 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 RASL12Q9NYN1 266 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 RPUSD1Q9UJJ7 312 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 POLDIP2Q9Y2S7 368 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 DOCK11Q5JSL3 2073 aa14.43□□□□□ -0.1
SHKBP1-203ENST00000594298 PQLC2LA1A4F0 135 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 A6NIN4 97 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 OR4C45A6NMZ5 311 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 H3BSH0 61 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 GLRA1P23415 457 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 HAAOP46952 286 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 HSPA13P48723 471 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 ETV1P50549 477 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 AQP4P55087 323 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 ST3GAL4Q11206 333 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 TAF9Q16594 264 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 RPL22L1Q6P5R6 122 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 HAGHLQ6PII5 290 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 METAP1DQ6UB28 335 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 GDPGP1Q6ZNW5 385 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 LY6G5BQ8NDX9 201 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 BPIFB6Q8NFQ5 453 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 OR5AK2Q8NH90 309 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 AQP3Q92482 292 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 DNTTIP1Q9H147 329 aa14.42□□□□□ -0.1
SHKBP1-203ENST00000594298 VWFP04275 2813 aa14.41□□□□□ -0.1
SHKBP1-203ENST00000594298 IGHV3OR15-7A0A075B7D8 119 aa14.41□□□□□ -0.1
SHKBP1-203ENST00000594298 TRBV2A0A0J9YWF9 115 aa14.41□□□□□ -0.1
SHKBP1-203ENST00000594298 FAM230AA0A1W2PPH8 454 aa14.41□□□□□ -0.1
SHKBP1-203ENST00000594298 J3QT63 122 aa14.41□□□□□ -0.1
SHKBP1-203ENST00000594298 AKR7A2O43488 359 aa14.41□□□□□ -0.1
SHKBP1-203ENST00000594298 OCM2P0CE71 109 aa14.41□□□□□ -0.1
SHKBP1-203ENST00000594298 OCMP0CE72 109 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-203ENST00000594298 PRKACBP22694 351 aa14.41□□□□□ -0.1
SHKBP1-203ENST00000594298 DMRTC1Q5HYR2 192 aa14.41□□□□□ -0.1
SHKBP1-203ENST00000594298 UTS2BQ765I0 119 aa14.41□□□□□ -0.1
SHKBP1-203ENST00000594298 VMO1Q7Z5L0 202 aa14.41□□□□□ -0.1
SHKBP1-203ENST00000594298 STX19Q8N4C7 294 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms